Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 208 1e-48 >seq6 Length=112752717 Score = 208 bits (230), Expect = 1e-48 Identities = 562/847 (66%), Gaps = 26/847 (3%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| ||| || || |||||| || ||||| ||||||| || ||| Sbjct 97172754 ATGTACAAGAAAGCGGAGGCATCGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGAC 97172695 Query 42369 A-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA---AGTTTTTC-CTCAAAAACATAC 42423 | | ||| |||||| || || | || ||| | ||| || |||| | | | Sbjct 97172694 ATCCGCCA-CTGGGAATCTCTCACCGACGGCGAGCGCCACTTTATCACTCA----CGTCC 97172640 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | |||||||||||||| || |||||||| ||| ||||| || ||| |||||||||| Sbjct 97172639 TTGCCTTCTTCGCCGCATCCGACGGCATCGTCCTGGAGAATCTTGCCGGAAGGTTCATGA 97172580 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||| ||| | ||||| ||| |||||||||||||||||| || || |||||| Sbjct 97172579 AGGAGGTTCAGGTCGCCGAGGCACGCGCCTTCTACGGCTTCCAGATCGCAATCGAGAACA 97172520 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC-GAGCGT 42602 | ||||| ||| ||||| | || ||| | || |||||| || | | || ||| Sbjct 97172519 TCCACTCAGAGATGTACAGCCTCCTTCTCGAAACTTACATCAAAGA-CTCATCAGAGAAG 97172461 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | || ||| | || || ||||| | || || | |||||||| || || ||||| Sbjct 97172460 AATCGTCTCTTCCACGCAATTGAGACCGTTCCTTGTGTAAAGAAGAAAGCTGAGTGGGCC 97172401 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 || |||||||| | | || | |||||| || | | || || || || | Sbjct 97172400 CTACGATGGATCGATGGCTCAGA---ATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGC 97172344 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782 ||||| || ||||||||||| || |||| ||| || || ||||| || || | | Sbjct 97172343 GTCGAAGGGATCTTCTTCTCCGGGAGCTTCTGCTCGATATTTTGGCTGAAAAAGCGTGGG 97172284 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 | ||||| || | |||||||||||||| | ||| | || || || || || | Sbjct 97172283 TTAATGCCAGGTTTAACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTCCACTGC 97172224 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC 42902 || || || ||| | |||| ||| | || ||| | |||| | | ||||||| || Sbjct 97172223 GATTTCGCGTGCTTGCTGTACTC---TCTTCTGAGGAAGAAGCTCCCTGAGGAGCGTGTG 97172167 Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC- 42961 || ||| | | ||| |||||||| || |||| |||||| | | |||| || Sbjct 97172166 AAGGGGATCGTGAAGGACGCCGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCT 97172107 Query 42962 --CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 || || |||| || |||||| ||||| ||| | |||| || ||| ||| || Sbjct 97172106 TGCGCGT---TGGTAGGAATGAACGGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCA 97172050 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 || | | || ||| | ||||| || | | ||||| | | ||| || || Sbjct 97172049 GATCGGTTGCTGGTGGCGCTTGGGTGCAAGAAG-GTGTACAATGTTCAGAACCCTTTTGA 97171991 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 | |||||| || ||| | |||| ||||||||||| || || ||||| || | || Sbjct 97171990 TTGGATGGAGCTTATTTCGCTTCAGGGGAAGACCAACTTCTTTGAAAAGCGTGTTGGGGA 97171931 Query 43139 CTACCAG 43145 |||||| Sbjct 97171930 GTACCAG 97171924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944321411010320