Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq2 82.4 6e-11 >seq3 Length=135057546 Score = 113 bits (124), Expect = 4e-20 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || |||| || ||||| | ||| ||||||||||||||||||||| || Sbjct 22722827 CCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGC- 22722885 Query 33961 AATTGTCGCTCG-TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || ||| || || ||||| ||||| || ||||| || || | ||||||||| || Sbjct 22722886 AAGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGATCAGGTGG 22722945 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTC 34076 | | ||||||||| |||||| |||| || | | || | || | |||||| Sbjct 22722946 GATACCCTCTTTGTCTTGGATTTTT-GCTT--TGACATTGTCAATTGTGTCCGAAGATTC 22723002 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || | |||||||| |||||||||||||| || |||||||||||||| Sbjct 22723003 GACCTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 22723053 >seq2 Length=93869048 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 |||| || || ||||||||||| |||||||||||||||||| || ||||| || Sbjct 84921319 AGCCTGAGGACAAGATGAAGCGTTGACTCCTTCTGAATGTTGTAGTCAGCCAAGGTGCGT 84921378 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || |||| ||||| ||||| || |||| |||||||||||| Sbjct 84921379 CCATCTTCCAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCC 84921423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397055107328614