Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq6 109 7e-19 seq3 91.5 2e-13 >seq6 Length=112752717 Score = 109 bits (120), Expect = 7e-19 Identities = 375/576 (65%), Gaps = 33/576 (6%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGA-TATTCTCCA 125816 ||| |||||||| ||||| || |||||||| |||||||| | |||| | || ||||| Sbjct 97171927 GTACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTG-AAGCGAAATAAGCTCCA 97171985 Query 125817 TAAAATCAAATGGGTTCT-----TTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAG 125871 | ||||||| ||||||| ||| | || || ||| ||||| || | || Sbjct 97171986 TCCAATCAAAAGGGTTCTGAACATTG---TACACCTTCTTG-CACCC-AAGCGCCACCAG 97172040 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 | ||||| | ||| ||||||| |||| | |||| || |||||| || | | Sbjct 97172041 CAACCGATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCAA 97172100 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 || || |||||||| | | ||| || |||| || |||||||| ||| |||||| Sbjct 97172101 CGCGCAAGGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTCCTTCACGAT 97172160 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCA-AAGTCTTGAAGAGTTC--CACG-- 126046 | | | ||| | | | || | || ||| ||||| | || | Sbjct 97172161 CCCCTTCACACGCTCCTCAGGGAGCTTCTTCCTCAGAAG------AGAGTACAGCAAGCA 97172214 Query 126047 -GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 || || || |||||| || || || || ||||| | || ||||||||| | || Sbjct 97172215 CGCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACC 97172274 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| | || ||||| |||| ||| || |||| || || || ||||||||||| Sbjct 97172275 TGGCATTAACCCACGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGAT 97172334 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-- 126223 || || || || |||||||| | || || || || || ||| | || | || Sbjct 97172335 CCCTTCGACGCAGGCGAACGCGACGATGCGTTCCGCGAA------CGATTCTGAGCCATC 97172388 Query 126224 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| | ||||||| || || |||| | ||| || ||||||| || || | Sbjct 97172389 GATCCATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGGTCTCAATTGCGTG 97172448 Query 126283 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTA 126318 ||||| ||||| ||||||| ||||||||||| Sbjct 97172449 GAAGAGACGATTCTTCTCTGATGAGTCTTTGATGTA 97172484 Score = 86.0 bits (94), Expect = 7e-12 Identities = 212/317 (67%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 10877 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGC 10936 |||||||||||||| |||| ||| || || ||||| || || | ||||| ||| | || Sbjct 18233762 AAGCCATCCATCTCCGTCAGGAGCTGGTTAATGGTCTGCTCCCTCTCATCGTTCCC--GC 18233705 Query 10937 ATAC--CACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 10994 | | ||| || | | ||| | || ||||| ||||| ||||| |||||||| || | Sbjct 18233704 CTCCGAGACCAGCCCCTCTCTGCCTCCCCACGGCATCAATCTCATCAATGAAAACAATGC 18233645 Query 10995 ACGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCC 11053 | || | ||| || ||| ||||| | ||| | || | ||||| || || Sbjct 18233644 ATGG-CGCCTTTGACTTGGCTTTCTCAAACAAATCCCTCACGCGGGAAGCACCAACCCCA 18233586 Query 11054 ACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCC 11113 ||||||| ||||| || | | || | || || ||| || || || ||||| Sbjct 18233585 ACAAACAGCTCCACGAACTCCGAAGCCGCGCAAGAGAAGAACGGTACTCCGGCCTCACCG 18233526 Query 11114 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCA 11173 || | || || || || ||||||||||| || |||||| ||| | ||||| || Sbjct 18233525 GCAACCGCCCGTGCCAGAAGGGTCTTCCCGGTTCCAGGTGGCCCCACCAGAAGACACCCT 18233466 Query 11174 CGTGGGATCCTGGCACC 11190 ||||||| | ||||| Sbjct 18233465 TTTGGGATCTTAGCACC 18233449 >seq3 Length=135057546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 227/339 (67%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 10819 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 10878 |||||| || ||| | ||| || || || || || | |||||| || | || || Sbjct 130918719 GTCAAGAATGTCAGCCCTGTTAGTAGCTGCAATTACGATGATGCCTGTATTACCCTCGAA 130918778 Query 10879 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGC-- 10936 |||||||| || ||||| || ||||||| || ||||| | |||||||||| | Sbjct 130918779 CCCATCCATTTCTGTCAAAAGCTGATTGAGTGTCTGTTCTCTTTCATCATTCCCTCCACC 130918838 Query 10937 -ATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 10995 || ||| | | || ||| | || || || ||||||||||| | ||| || || || Sbjct 130918839 AATTCCAGTCCCTCT---TTGTCTCCCAACAGCATCAATTTCATCAACGAACACAATGCA 130918895 Query 10996 CGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGGACTCTCTTGGCACCGACACCC 11053 || ||| || || |||| || | ||| |||||||| ||||||| ||| Sbjct 130918896 AGGGGCATTCTCTTTAGC--CTTCTTGAATAAATCACGGACTCTTGAAGCACCGATACCA 130918953 Query 11054 ACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACC 11112 |||||||| || ||||| | | | || |||| || ||| || || | ||| || Sbjct 130918954 ACAAACATCTCAACAAACTCAGAACCTGAG-ATTGAGAAGAACGGAACACCAGCTTCGCC 130919012 Query 11113 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 ||||| || ||| | ||||||||||| || ||||| Sbjct 130919013 AGCGATCGCCTTGGCCAAAAGGGTCTTCCCAGTTCCAGG 130919051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597342347351560