Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 102 6e-17 seq6 95.1 9e-15 >seq3 Length=135057546 Score = 102 bits (112), Expect = 6e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 ||||||||| ||| | | || || ||||| || || || || || ||||||||||| | Sbjct 22723281 TGCCACCTCTCAAACGGAGCACCAAGTGAAGCGTTGACTCCTTCTGAATGTTGTAATCTG 22723340 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 || || | || | || || | || || ||||| | ||||| | ||| ||||| | Sbjct 22723341 CT-AGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 22723399 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 || || || || ||||| |||||| ||| ||| | || || || || ||| Sbjct 22723400 GGGATACCCTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATGGTGTCCGAGGATTCC 22723459 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||||||| |||||||| || |||| || ||||| ||||||||||| Sbjct 22723460 ACCTCTAAGGTGATGGTTTTCCCAGTCAAGGTCTTTACGAAAATTTGCAT 22723509 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| || | | || || || || || || || || || |||||||||||| Sbjct 22723509 TGCCACCTCTTAAACGAAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGG 22723568 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || |||| | ||||| | |||||| || || | || | | || ||||| | Sbjct 22723569 CAAGGGTTCTACCATCTTCAAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGGTCAGGAG 22723628 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | |||||||| || || ||||||| || ||| | || || |||||| | |||| | Sbjct 22723629 GGATTCCTTCTTTATCCTGAATTTTGGCCTTGACATTATCAATTGTATCGGAACTTTCCA 22723688 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||| || || |||| ||||| || || |||||||| Sbjct 22723689 CCTCAAGGGTGATGGTCTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 22723737 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030 ||| ||||| || || ||||| || || || || || ||| || | || || ||| Sbjct 22722394 ATGGAGGGTCGATTCCTTTTGGATATTATAGTC--TGCTAATGTACGACCATCCTCCAAT 22722451 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||||||||| | || | | ||| || ||| ||||| || |||||||| ||| Sbjct 22722452 TGTTTGCCAGCAAAGATGAGCCTCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGAATC 22722511 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 || || ||| | || || ||||| |||| || || || |||||||| || || Sbjct 22722512 TTCGCCTTCACATTATCAATGGTATCAGAGCTTTCGACCTCCAAAGTAATGGTCTTCCCC 22722571 Query 15151 GTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || ||||||||||||||| Sbjct 22722572 GTCAGGGTCTTCACAAAAATTTGCATA 22722598 >seq6 Length=112752717 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || ||||| || | ||| | ||| | || || || || |||||||||||||| Sbjct 25199981 CCTCCACGCAACCTAAGAACAAGATGCAACGTCGACTCCTTCTGTATGTTGTAATCAGCA 25200040 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | ||| |||| |||||||| || |||||| | || | |||||||| || || Sbjct 25200041 AGCGTCCTCCCGTCCTCTAATTGCTTCCCAGCGAAGATGAGTCGCTGTTGATCAGGAGGG 25200100 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||| ||| || || | ||||| || || | ||| || Sbjct 25200101 ATTCCTTCTTTATCTTGAATCTTGGCCTTCACGTTGTCTATTGTGTCCGAAGATTCAACC 25200160 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || || || ||||| ||||| || ||||| Sbjct 25200161 TCGAGAGTTATGGTCTTTCCCGTTAGGGTTTTCACAAAGATCTGCAT 25200207 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||| ||||| || || ||||| |||||||||||| ||| | | |||| || Sbjct 25199772 AACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCCAGAGTGCGTCCGTCCTC 25199831 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || ||||| | || | |||||| ||||| |||||| || || |||| Sbjct 25199832 AAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCCTC--TGTCCTG 25199889 Query 15087 AAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || ||||| || ||| | || |||||||| | | || || |||| || || || | Sbjct 25199890 TATCTTTGC-CTTCACATTATCAATAGTATCAGAACTCTCCACCTCTAGCGTTATCGTCT 25199948 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| || || ||||| ||||| Sbjct 25199949 TCCCGGTTAGAGTCTTCACGAAAATCTGCAT 25199979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357385435937495