Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 3e-14 seq3 87.8 1e-12 >seq6 Length=112752717 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 |||||| || | ||| || || | || | ||| || ||||| || || |||||||| Sbjct 25200208 GCCGCCGCGAAGACGGAGAACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCGGC 25200267 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | ||| |||| || | ||||||||| | || || | ||||||||||| | || Sbjct 25200268 GAGGGTGCGACCATCCTCTAGCTGTTTCCCGGCGAAGATGAGTCGCTGCTGATCGGGAGG 25200327 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | |||||||||||| || || || | ||| | | | |||||| | | ||| | Sbjct 25200328 AATGCCTTCTTTGTCTTGAATCTTGGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCAA 25200386 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 | |||| ||| || || || || |||| ||||| ||||||||||||||| || Sbjct 25200387 CCTCCAGAGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCATGCCG 25200439 >seq3 Length=135057546 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 39507 CAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATC 39566 ||| |||||||||||||| ||| |||||||| || ||||| || | | || |||| Sbjct 22722613 CAGAACCAAATGCAAAGTAGATTCCTTTTGTATGTTGTAATCAGCAAGAGTACGGCCATC 22722672 Query 39567 GTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC 39626 || | || ||||| |||| || | | ||||||||||| || | || |||||||| Sbjct 22722673 TTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCCGGAGGGATACCCTCTTTGTC 22722732 Query 39627 GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGT 39686 || || || | | | | ||| || | ||||| || |||||||| ||||| Sbjct 22722733 CTGAATCTTCGCCTTCACATTATCAATTGTATCAGAACTTTCAACCTCCAAAGTGATTGT 22722792 Query 39687 TTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || || || || ||||| ||||| Sbjct 22722793 CTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 22722825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363220014531