Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq6 111 2e-19 seq3 102 1e-16 >seq4 Length=123556382 Score = 138 bits (152), Expect = 1e-27 Identities = 310/463 (67%), Gaps = 16/463 (3%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || ||||||| ||||| || | | || || Sbjct 22707503 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATGACAATGATACCGGTATTACCCTCGAAC 22707444 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || | | Sbjct 22707443 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 22707386 Query 9345 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATG 9402 | | |||| || | |||| |||| || ||||| || ||||||| || ||||| || | Sbjct 22707385 CAATTCCAGTACCTCTTTGCCTTCCAACAGCATCGATTTCATCAACAAAAACAATGCAAG 22707326 Query 9403 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAA 9462 | ||| || ||| | | || | ||| ||||| | || || |||||||||| Sbjct 22707325 GAGCATTCTCTTTGGCCTTCTTGAATAAATCACGAACACGAGAAGCACCAACACCAACAA 22707266 Query 9463 ACATCTCCACAAAGTTTGCGGCGGAACAT----TG--GATGAAGGGGACATTAGATTCAC 9516 ||||||| ||||| | |||||| | || || ||| |||||| | ||| | Sbjct 22707265 ACATCTCAACAAACT------CGGAACCTGAGATGGAGAAGAATGGGACACCTGCTTCCC 22707212 Query 9517 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9576 | ||||| || ||| | || |||||||| || ||||| ||| | || || | | Sbjct 22707211 CTGCAATAGCCTTGGCTAACAGCGTCTTACCGGTTCCTGGAGGACCAACAAGAAGAACTC 22707152 Query 9577 CCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAA 9636 | ||||| || ||| || | | |||||||| | ||| ||||| ||||| | Sbjct 22707151 CTTTCGGAATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACTA 22707092 Query 9637 TCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 ||| || || | ||| || | || | ||| ||||||| Sbjct 22707091 CCTCCATAAAGTCCTGTTTAGCTTCATCCACCCCAGCAACATC 22707049 >seq6 Length=112752717 Score = 111 bits (122), Expect = 2e-19 Identities = 250/371 (67%), Gaps = 6/371 (2%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || ||||||||||| |||| || |||||||| || || |||| ||||| ||| | || Sbjct 18233762 AAGCCATCCATCTCCGTCAGGAGCTGGTTAATGGTCTGCTCCCTCTCATCGTTCCC--GC 18233705 Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 | | | ||||| | | ||| | |||||||||||||||||||||||||| ||||| | Sbjct 18233704 CTCCGAGACCAGCCCCTCTCTGCCTCCCCACGGCATCAATCTCATCAATGAAAACAATGC 18233645 Query 9400 ATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAA 9459 |||| ||| ||| | ||||| | ||| | || | || || || |||| Sbjct 18233644 ATGGCGCCTTTGACTTGGCTTTCTCAAACAAATCCCTCACGCGGGAAGCACCAACCCCAA 18233585 Query 9460 CAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCG 9519 |||||| |||||| || | | || | || || ||| || || | ||||| | Sbjct 18233584 CAAACAGCTCCACGAACTCCGAAGCCGCGCAAGAGAAGAACGGTACTCCGGCCTCACCGG 18233525 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCC- 9578 ||| || || || ||||| ||||| || || || || ||| | | || | ||||| Sbjct 18233524 CAACCGCCCGTGCCAGAAGGGTCTTCCCGGTTCCAGGTGGCCCCACCA-GAAGACACCCT 18233466 Query 9579 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATC 9638 ||| ||||| || || | ||| | ||||| | |||||||||||| |||| Sbjct 18233465 TTTGGGATCTTAGCACCCAAAGCGGTGTACTTGTCAGGGTTCTTGAGAAAATCAACAACT 18233406 Query 9639 TCTTCCAATTC 9649 || | || ||| Sbjct 18233405 TCCTGCAGTTC 18233395 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| || |||||||| || || | || || |||||| || |||||||| | || Sbjct 97172227 GTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACCC 97172286 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 ||||| |||| |||| | || | |||||| ||||||||||||||| || || || || Sbjct 97172287 ACGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACGCA 97172346 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || ||||| | | ||| || ||||| || Sbjct 97172347 GGCGAACGCGACGATGCGTTCCGCGAACGA 97172376 >seq3 Length=135057546 Score = 102 bits (112), Expect = 1e-16 Identities = 277/420 (66%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || || || | || ||||| | | || || Sbjct 130918720 TCAAGAATGTCAGCCCTGTTAGTAGCTGCAATTACGATGATGCCTGTATTACCCTCGAAC 130918779 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||| || || | || ||||| | |||||||||| || | Sbjct 130918780 CCATCCATTTCTGTCAAAAGCTGATTGAGTGTCTGTTCTCTTTCATCATTCCCT---CCA 130918836 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| | || || |||||||| ||||||| ||| ||||| || Sbjct 130918837 CCAATTCCAGTCCCTCTTTGTCTCCCAACAGCATCAATTTCATCAACGAACACAATGCAA 130918896 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || || | | || | ||| || || ||| || || | ||||||| Sbjct 130918897 GGGGCATTCTCTTTAGCCTTCTTGAATAAATCACGGACTCTTGAAGCACCGATACCAACA 130918956 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| || ||| || ||| || ||| || || Sbjct 130918957 AACATCTCAACAAACTCAGAACCTG-AGATTGAGAAGAACGGAACACCAGCTTCGCCAGC 130919015 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 || || ||| | ||| ||||| || || || || || | || || ||||| Sbjct 130919016 GATCGCCTTGGCCAAAAGGGTCTTCCCAGTTCCAGGAGGTCCAACAAGAAGAACACCCTT 130919075 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 ||| || || ||| || | | || ||||| | ||| ||||| ||||| | ||| Sbjct 130919076 TGGTATGCGAGCTCCAACAGCAGTGAACCTTTCAGGCTTCTTCAGAAACTCCACTACCTC 130919135 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || || ||||| || ||||||||||| || ||||| | || ||| ||||| | ||| Sbjct 112999184 TGAGGCCTTGGAGTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGA 112999125 Query 107228 GACATCTTGTCGTATG-TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| ||| ||| | ||| || |||| || ||||| ||| ||| || || | || Sbjct 112999124 GACATCATGTGGTAAGTTCTGACAG-CAGATTCTATGTCATCCTTGTGAATTCCAACAGC 112999066 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA-- 107344 || | ||| ||||||| ||||| |||||| | | || | || || || |||| Sbjct 112999065 AACCCTCATCAACATGTGCTGGGGCCTTTCCACAACCTTTCC-TTGAACC-TTCAAGAGG 112999008 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 ||| | |||| |||||||| | |||||||||| || | || |||||| Sbjct 112999007 TAGGACCTCTCCAGGGTTTTAAAACCAAAGTAATCATAGTCGAAGTCCC 112998959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589969686236680