Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 seq5 114 1e-20 seq6 104 2e-17 seq9 86.0 5e-12 >seq3 Length=135057546 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 ||||||||||||||||||| ||| ||| || |||||||||||||| | || | | Sbjct 22723064 AGCCGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTT 22723123 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||||||||||||| || || | ||| ||||| | |||| ||||||| Sbjct 22723124 CCATCTTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGAATGCCCTCC 22723183 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | || || | |||||||| | || Sbjct 22723184 TTGTCCTGAATCTTAGCTTTCACATTGTCAATGGTATCAGAGGATTCCACCTCTAGTGTT 22723243 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||||||| || |||||||||||||| Sbjct 22723244 ATGGTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 22723281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||| ||||| || || | || | ||| | || ||||| || || || ||||| Sbjct 22722407 TCCTTTTGGATATTATAGTCTGCTAATGTACGACCATCCTCCAATTGTTTGCCAGCAAAG 22722466 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || | ||| ||||| | ||||| ||||||||||| |||||| || ||| | Sbjct 22722467 ATGAGCCTCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTA 22722526 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || || ||||||| ||||| || || ||||||| || || ||| Sbjct 22722527 TCAATGGTATCAGAGCTTTCGACCTCCAAAGTAATGGTCTTCCCCGTCAGGGTCTTCACA 22722586 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 22722587 AAAATTTGCAT 22722597 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | ||| | ||| ||| || ||||| |||||||||| || | | Sbjct 22722836 AGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTT 22722895 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||||||||| ||||| || |||| ||| ||||| | || | ||||| Sbjct 22722896 CCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGATCAGGTGGGATACCCTCT 22722955 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || ||| ||| ||| | | | || || | || ||||||| || Sbjct 22722956 TTGTCTTGGATTTTTGCTTTGACATTGTCAATTGTGTCCGAAGATTCGACCTCCAGGGTT 22723015 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || ||||| || ||||| Sbjct 22723016 ATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 22723053 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || ||| || || || || |||||||| | || | || Sbjct 124959432 AGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCTAAGGTGCGG 124959491 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||| || |||||||| |||| | ||| || |||| ||||| |||||| Sbjct 124959492 CCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCC 124959551 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | | || || ||| || |||| || Sbjct 124959552 TTGTCTTGGATCTTTGCTTTGACATTATCGATGGTGTCCGAACTCTCAACTTCCAGGGTG 124959611 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || || ||||||||||| Sbjct 124959612 ATTGTCTTTCCGGTAAGGGTCTTAACGAAAATCTGCAT 124959649 >seq5 Length=110037037 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || |||||||||||||||| || | | | || ||||||||| Sbjct 20100469 TGAAGAGTGGACTCCTTCTGAATATTGTAATCAGCAAGGGTCCTTCCATCTTCCAACTGC 20100528 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || |||| | ||| || |||| ||||| ||||||||||| |||||| Sbjct 20100529 TTCCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTG 20100588 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 ||| ||| | | | || || ||||||||| | ||||| || || || ||| Sbjct 20100589 GCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCAAGGGTAATGGTCTTCCCAGTC 20100648 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||||||||||||| Sbjct 20100649 AAAGTCTTAACAAAAATCTGCAT 20100671 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | ||| || || ||| ||||| || ||||| || | ||| | || Sbjct 20100910 AGACGCAAGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCAAGAGTACGG 20100969 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||||||||| || |||| || ||| || |||| ||||| ||||||| Sbjct 20100970 CCATCCTCGAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCC 20101029 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || ||| | | | | || || ||||||||| | ||| Sbjct 20101030 TTGTCTTGGATTTTGGCCTTCACATTATCGATTGTGTCAGAGCTCTCCACCTCAAGGGTA 20101089 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || ||||| |||||||| Sbjct 20101090 ATTGTCTTTCCGGTAAGGGTCTTAACAAAGATCTGCAT 20101127 >seq6 Length=112752717 Score = 104 bits (114), Expect = 2e-17 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 || ||||| | |||| | || | ||| || ||| ||| |||||||| |||||||| Sbjct 25199752 TCACCGCCACGGAGCCTGAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCG 25199811 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 | ||| | || |||| || | |||||| || ||||| || || ||||| || |||| Sbjct 25199812 GCCAGAGTGCGTCCGTCCTCAAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGT 25199871 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 |||| ||||| |||| |||||| || ||| | | | || || || |||| Sbjct 25199872 GGAATCCCCTC--TGTCCTGTATCTTTGCCTTCACATTATCAATAGTATCAGAACTCTCC 25199929 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| | ||| ||||| || || || | ||| || || |||||||||||| Sbjct 25199930 ACCTCTAGCGTTATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTGCATC 25199980 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || |||||| ||| || || ||||| || || | || | ||| |||| || | |||| Sbjct 25200461 TGGAGCGTGGACTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGC 25200520 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || || || ||||| || |||| || | ||| |||||||| ||||| Sbjct 25200521 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTA 25200580 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || | ||||||||||| |||||||| || || || Sbjct 25200581 GCCTTCACATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGTT 25200640 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | ||||| || || |||||||| Sbjct 25200641 AGGGTTTTCACGAAGATCTGCAT 25200663 >seq9 Length=120672674 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||| | || || ||| ||| || ||||| |||||||||| Sbjct 111904804 CCTCCCCTGAGGCGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCA 111904863 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || || | ||||||||| ||||| |||| | || || |||| ||| Sbjct 111904864 AGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTTTGCTGGTCCGGTGGA 111904923 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||| || |||||| || ||| | | | || || ||||||| Sbjct 111904924 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTGTCAATTGTGTCGGAACTCTCCACC 111904983 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| || | || || |||||||||||||| Sbjct 111904984 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 111905030 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||| | || || ||| ||| || ||||| |||||||||| Sbjct 111941135 CCTCCCCTGAGGCGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCA 111941194 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || || | ||||||||| ||||| |||| | || || |||| ||| Sbjct 111941195 AGGGTCCTTCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTTTGCTGGTCCGGTGGA 111941254 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||| || |||||| || ||| | | | || || ||||||| Sbjct 111941255 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTGTCAATTGTGTCGGAACTCTCCACC 111941314 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| || | || || |||||||||||||| Sbjct 111941315 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 111941361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || ||| ||| || ||||| || || |||| || | | Sbjct 111904585 AGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTT 111904644 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| |||| | ||| || |||| || | || ||| Sbjct 111904645 CCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCC 111904704 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| || ||| | | | || || ||||||||||| || Sbjct 111904705 TTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCACCTCCAAGGTG 111904764 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || |||||||| || ||||||||||||||| Sbjct 111904765 ATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCATC 111904803 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || ||| ||| || ||||| || || |||| || | | Sbjct 111940916 AGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTT 111940975 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| |||| | ||| || |||| || | || ||| Sbjct 111940976 CCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCC 111941035 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| || ||| | | | || || ||||||||||| || Sbjct 111941036 TTATCCTGAATCTTAGCCTTCACATTGTCAATCGTGTCGGAGCTCTCCACCTCCAAGGTG 111941095 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || |||||||| || ||||||||||||||| Sbjct 111941096 ATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCATC 111941134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380930603485761