Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 188 1e-42 >seq6 Length=112752717 Score = 188 bits (208), Expect = 1e-42 Identities = 570/867 (66%), Gaps = 30/867 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | || ||||||||||| |||||||||| | ||| || ||| Sbjct 97171924 CTGGTACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGCTC 97171983 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||| | || ||||| | || |||||| | || || || | | ||||| Sbjct 97171984 CATCCAATCAAAAGGGTTCTGAACATTGTACACCTTCTTG-CAC-CCAAGCGCCACCAGC 97172041 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 | |||| || ||| |||| || || | ||| ||| |||||| |||| | Sbjct 97172042 AACCGATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCA-- 97172099 Query 48017 GACACGGGCAA---AGC-CTTTGTG-AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071 ||| |||| ||| | | | | ||||||| ||||||| | |||||| ||| || Sbjct 97172100 ---ACGCGCAAGGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTCCTTCA 97172156 Query 48072 CAATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 | ||| ||| || || ||| | | | || || | ||| | | || |||| || Sbjct 97172157 CGATCCCCTTCACACGCTCCTCAGGGAGCTTCTTCCTCAGAAGAGAG---TACAGCAAGC 97172213 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || || || | ||| | |||||| || || ||| | | |||| |||||| | || Sbjct 97172214 ACGCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAAC 97172273 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||| | ||| | || ||| ||||| || || | ||| || |||||||||| Sbjct 97172274 CTGGCATTAACCCACGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGA 97172333 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT-GTCTGAG 48310 | || || || ||||||||| || | || |||| || |||| | | | Sbjct 97172334 TCCCTTCGACGCAGGCGAACGCGACGATGCGTTCCGCGAACGA----TTCTGAGCCATCG 97172389 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || ||||| || || |||||||| | || || | ||||| || || || Sbjct 97172390 ATCCATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGGTCTCAATTGCGTGG 97172449 Query 48371 AAGAGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 ||||| ||||| ||| || ||| | || || ||| || |||| Sbjct 97172450 AAGAGACGATTCTT---CTCTGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTAC 97172506 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 ||||| ||||| | ||||| || ||||||||||| ||||||||||| | ||||| Sbjct 97172507 ATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGCG 97172566 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGC 48546 ||||| || || | ||| || ||| || |||||||| ||| || || || || || Sbjct 97172567 ACCTGAACCTCCTTCATGAACCT-TCCGGCAAGATTCTCCAGGACGATGCCGTCGGATGC 97172625 Query 48547 AGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCA 48606 || |||||||||||||| || | | || ||||||||| || |||||||| | ||| Sbjct 97172626 GGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCA 97172685 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | | ||| | ||||| ||||| ||| | |||||||| || || ||||| Sbjct 97172686 GTGGCGGATGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTT 97172745 Query 48667 TTTGTACATGCCCCATATGTCCGGATA 48693 |||||||| ||||||| || || || Sbjct 97172746 CTTGTACATTTCCCATATCTCAGGGTA 97172772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931515252250880