Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq3 104 3e-17 seq4 95.1 1e-14 >seq6 Length=112752717 Score = 107 bits (118), Expect = 2e-18 Identities = 247/370 (67%), Gaps = 4/370 (1%) Strand=Plus/Plus Query 175222 GAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCC 175281 ||||| | || |||| |||||||||||| | || || | || | ||||| Sbjct 18233395 GAACTGCAGGAAGTTGTTGATTTTCTCAAGAACCCTGACAAGTACACCGCTTTGGGTGCT 18233454 Query 175282 AAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCC 175341 |||||||| ||| ||||| | ||| || || || || |||||||| || || Sbjct 18233455 AAGATCCCAAAAGGGTGTCTTCTGGTGGGGCCACCTGGAACCGGGAAGACCCTTCTGGCA 18233514 Query 175342 CGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTG 175401 || || | || ||||| | || || ||| || ||| | || | | || ||| Sbjct 18233515 CGGGCGGTTGCCGGTGAGGCCGGAGTACCGTTCTTCTCTTGCGCGGCTTCGGAGTTCGTG 18233574 Query 175402 GAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAA 175461 ||| |||||||||| || ||||| | || | ||| | ||||| | ||| | Sbjct 18233575 GAGCTGTTTGTTGGGGTTGGTGCTTCCCGCGTGAGGGATTTGTTTGAGAAAGCCAAGTCA 18233634 Query 175462 AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCT 175521 || ||||| ||||| |||||||||||||||||||| ||||| | ||| | | ||| Sbjct 18233635 AAGGCGCCATGCATTGTTTTCATTGATGAGATTGATGCCGTGGGGAGGCAGAGAGGGGCT 18233694 Query 175522 GG--TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGA 175579 || | | | || | || || ||||| || || || ||||| || || || || |||| Sbjct 18233695 GGTCTCGGAGGC--GGGAACGATGAGAGGGAGCAGACCATTAACCAGCTCCTGACGGAGA 18233752 Query 175580 TGGATGGCTT 175589 |||||||||| Sbjct 18233753 TGGATGGCTT 18233762 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || ||||| || ||| | | ||||| || || || || || ||||||||||||||| Sbjct 97172376 TCGTTCGCGGAACGCATCGTCGCGTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGGAGC 97172317 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 |||||| | || | |||| |||| ||||| || | |||||||| || |||||| || Sbjct 97172316 TTCTGCTCGATATTTTGGCTGAAAAAGCGTGGGTTAATGCCAGGTTTAACCTTCTCGAAC 97172257 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || | || || |||||||| || |||||| Sbjct 97172256 GAGTTGATCTCGCGAGATGAAGGCCTCCAC 97172227 >seq3 Length=135057546 Score = 104 bits (114), Expect = 3e-17 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAACG 75186 |||||| || | || |||||||||| | |||||||| |||| | ||| |||| || | Sbjct 112998959 GGGACTTCGACTATGATTACTTTGGTTTTAAAACCCTGGAGAGGTCCTACCTCTTGAA-G 112999017 Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246 | || | || | | |||||| || ||| ||||||| ||| |||| || | || || Sbjct 112999018 GTTCAA-GGAAAGGTTGTGGAAAGGCCCCAGCACATGTTGATGAGGGTTGCTGTTGGAAT 112999076 Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGA-CATACGACAAGATGTCCCAAGGTATGT 75305 ||| ||| ||||| || |||| || ||| | ||| ||| |||||| ||| | || Sbjct 112999077 TCACAAGGATGACATAGAATCTG-CTGTCAGAACTTACCACATGATGTCTCAAAGATGGT 112999135 Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354 ||| ||| || | ||||| || ||||||||||| || ||||| || || Sbjct 112999136 TCACTCATGCTTCCCCAACACTTTTCAATGCTGGAACTCCAAGGCCTCA 112999184 Score = 95.1 bits (104), Expect = 1e-14 Identities = 225/336 (67%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || || || || |||||||| | ||| || ||||| || ||| | ||| || ||| Sbjct 130919051 CCTGGAACTGGGAAGACCCTTTTGGCCAAGGCGATCGCTGGCGAAGCTGGTGTTCCGTTC 130918992 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || || | ||| | | | ||||| ||||||||||||||| | ||||| ||| || Sbjct 130918991 TTCTCAAT-CTCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTATCGGTGCTTCAAGAGT 130918933 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 || ||| | || | | || || ||| || || ||||| ||| ||||||| || Sbjct 130918932 CCGTGATTTATTCAAGAAGGCTAAAGAGAATGCCCCTTGCATTGTGTTCGTTGATGAAAT 130918873 Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGAGAGA 175550 |||||| || || | ||| | | |||| |||| || ||||| || ||||| Sbjct 130918872 TGATGCTGTTGGGAGACAAAGAGGGACTGGAATTGGT---GGAGGGAATGATGAAAGAGA 130918816 Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGT 175610 ||| ||| | ||||| || | || || |||||||| || || | | || ||||| | Sbjct 130918815 ACAGACACTCAATCAGCTTTTGACAGAAATGGATGGGTTCGAGGGTAATACAGGCATCAT 130918756 Query 175611 GGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 || ||||| || ||||| | | || || ||||| Sbjct 130918755 CGTAATTGCAGCTACTAACAGGGCTGACATTCTTGA 130918720 >seq4 Length=123556382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 297/458 (65%), Gaps = 4/458 (1%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||||| ||| | || | || ||| | || || ||| | ||||| ||||| || Sbjct 22707048 TGATGTTGCTGGGGTGGATGAAGCTAAACAGGACTTTATGGAGGTAGTGGAGTTTCTGAA 22707107 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | | || ||||| | || ||| || || || ||| | ||||| | || Sbjct 22707108 GAAGCCTGAGAGGTTCACTGCTGTTGGGGCTCGCATTCCGAAAGGAGTTCTTCTTGTTGG 22707167 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | ||||| || || ||||| || | ||| || || || || ||| || |||||| Sbjct 22707168 TCCTCCAGGAACCGGTAAGACGCTGTTAGCCAAGGCTATTGCAGGGGAAGCAGGTGTCCC 22707227 Query 175371 ATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAG 175430 |||| || ||| | | | ||||| ||||||||||||||||| ||||| | Sbjct 22707228 ATTCTTCTCCATCTCAGGTTCCGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTCG 22707287 Query 175431 GGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGA 175490 ||||| ||| | || | | ||| || ||| || || ||||| || ||||||| Sbjct 22707288 TGTTCGTGATTTATTCAAGAAGGCCAAAGAGAATGCTCCTTGCATTGTTTTTGTTGATGA 22707347 Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGA 175548 || ||||| || || | |||| | | |||| | | | | || ||||| || ||| Sbjct 22707348 AATCGATGCTGTTGGAAGGCAAAGAGGTACTGGAATTGGAGG--AGGGAATGATGAAAGA 22707405 Query 175549 GAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATT 175608 ||||| || | || ||||| | || || |||||||| || || | | || || || Sbjct 22707406 GAACAGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTCGAGGGTAATACCGGTATC 22707465 Query 175609 GTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 | || ||||| || ||||| | | || || ||||| Sbjct 22707466 ATTGTCATTGCAGCAACTAACAGAGCTGACATTCTTGA 22707503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596558362120160