Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3 122 2e-22 seq6 109 1e-18 seq1 86.0 1e-11 >seq3 Length=135057546 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| || || || || | ||| || || | ||| || || || |||||| Sbjct 22722824 ATTCCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCA 22722883 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| ||||| || |||||||||||||| | |||||| ||||||||| Sbjct 22722884 GCAAGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGATCAGGT 22722943 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| ||||| ||| ||||| || | || || ||||| Sbjct 22722944 GGGATACCCTCTTTGTCTTGGATTTTTGCTTTGACATTGTCAATTGTGTCCGAAGATTCG 22723003 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || |||| ||| || | ||| || ||||| Sbjct 22723004 ACCTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 22723053 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | || || || || ||||||||||| | ||| || ||||| ||||| Sbjct 22723052 ATGCCACCACGGAGCCGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCT 22723111 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | || ||||| |||||||| | ||||| ||||| ||| Sbjct 22723112 GCAAGCGTCCTTCCATCTTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGATCTGGT 22723171 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || ||| ||| ||||| || | ||| || ||||| Sbjct 22723172 GGAATGCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATGGTATCAGAGGATTCC 22723231 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || ||||| || || || || || || | ||| |||||||| Sbjct 22723232 ACCTCTAGTGTTATGGTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 22723281 Score = 100 bits (110), Expect = 6e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||||||||| || | |||||| || |||| ||||||||||| ||||||||||| | || Sbjct 22722415 GATATTATAGTCTGCTAATGTACGACCATCCTCCAATTGTTTGCCAGCAAAGATGAGCCT 22722474 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| || || || || || || || || || || || |||||| || | Sbjct 22722475 CTGCTGATCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTATCAATGGT 22722534 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || ||| || || | ||||||||| || || || | || || | ||| || || Sbjct 22722535 ATCAGAGCTTTCGACCTCCAAAGTAATGGTCTTCCCCGTCAGGGTCTTCACAAAAATTTG 22722594 Query 192534 CAT 192536 ||| Sbjct 22722595 CAT 22722597 >seq6 Length=112752717 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441 || || ||||| || ||||| ||||| | || |||||||||||| || |||||||||||| Sbjct 25200053 TCCTCTAATTGCTTCCCAGCGAAGATGAGTCGCTGTTGATCAGGAGGGATTCCTTCTTTA 25200112 Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501 ||||| || || || || || ||| | || || ||||| || || ||||| ||| Sbjct 25200113 TCTTGAATCTTGGCCTTCACGTTGTCTATTGTGTCCGAAGATTCAACCTCGAGAGTTATG 25200172 Query 192502 GTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||| ||||| | ||| |||||||| Sbjct 25200173 GTCTTTCCCGTTAGGGTTTTCACAAAGATCTGCAT 25200207 >seq1 Length=107035537 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883 || ||||| ||| ||| | ||||| || |||||||| | ||||| ||| || || Sbjct 97981414 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATTAGCTCATTTGAAAATGTCAAA 97981355 Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATAT 49918 ||||||||||||||||||||||||||||| ||||| Sbjct 97981354 CCTGGCATTAATCCTCTCTTTTTAAGCCAGAATAT 97981320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984460991229450