Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 140 1e-27 seq4 138 3e-27 seq3 129 2e-24 seq9 120 9e-22 seq6 116 1e-20 seq8 87.8 5e-12 seq7 86.0 2e-11 >seq5 Length=110037037 Score = 140 bits (154), Expect = 1e-27 Identities = 236/339 (70%), Gaps = 2/339 (1%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 || || || ||| |||||| || ||| ||||| |||||| ||| | | || | | Sbjct 4026433 TTCCTAACTGTCCCATCATACTTAACCATGATGTCCTCCATAGCCTTCACAAGCCGTCTC 4026492 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 || || || |||||| ||| || || || || |||||||| ||||| | ||||| ||| Sbjct 4026493 TGGATGTACCCAGTTTCAGAAGTCTTCACTGCAGTATCAATAAGACCTTCTCGACCTCCC 4026552 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || |||||||| || | ||| | || || || | | | | ||| |||| || || Sbjct 4026553 ATGGCATGGAAAAAGAACTCCTGAGGGGTAAGTCCACGGAGATATGAGTTCTCCACAAAG 4026612 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC-ATA 302777 ||||| || ||| || || || |||||||| ||||| |||| | ||| | | Sbjct 4026613 CCACGACTTTCAGGCCCATAATCATCTTTTGTAAAGTGGGGCAGTGTCC-GATCTATAAA 4026671 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 || ||||| || | ||| || ||||| ||||||||||||| || | | ||||||| || Sbjct 4026672 CCCATATGGAATTCTCTTCCCCTCAACATTCTGCTGTCCCACACAAGCAGTCATCTGAGA 4026731 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||||| | | ||| || |||||||| || | ||||| Sbjct 4026732 TATATTGATAAAACTTCCTTTGGAGCCTGCTGTGACCAT 4026770 >seq4 Length=123556382 Score = 138 bits (152), Expect = 3e-27 Identities = 339/507 (67%), Gaps = 14/507 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||||| |||| | ||| || | ||| | || || |||||||| |||||| Sbjct 22707536 CTATCAAACCGTCCAGGTCTCAATAAAGCAGAGTCAAGAATGTCAGCTCTGTTAGTTGCT 22707477 Query 288910 GCCAATACAACAATAGATTCGGTTTG---CTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || | |||| ||| |||| | || || |||||||| ||| |||| ||| Sbjct 22707476 GCAATGACAATGATAC---CGGTATTACCCTCGAACCCATCCATTTCTGTCAAAAGTTGG 22707420 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || || || ||||| ||||||||||| |||| ||| | | | ||| || Sbjct 22707419 TTGAGGGTCTGTTCTCTTTCATCATTCCCTCCTCC--AATTCC---AGTACCTCTTTGCC 22707365 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || ||||||||||| ||||| |||| |||| | || |||| ||| | | | || | Sbjct 22707364 TT-CCAACAGCATCGATTTCATCAACAAAAACAATGCAAGGAGCATTCTCTTTGGCCTTC 22707306 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||||| || | ||||| || || |||| ||||||| |||| || ||||| || ||| Sbjct 22707305 TTGAATAAATCACGAACACGAGAAGCACCAACACCAACAAACATCTCAACAAACTCGGAA 22707246 Query 289147 GCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | || | | || | ||||| ||| |||||| ||||| | ||| | || | || || Sbjct 22707245 CCTGAGA-TGGAGAAGAATGGGACACCTGCTTCCCCTGCAATAGCCTTGGCTAACAGCGT 22707187 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 |||||| ||||| || || || | | |||||||| || || | |||||| ||| Sbjct 22707186 CTTACCGGTTCCTGGAGGACCAACAAGAAGAACTCCTTTCGGAATGCGAGCCCCAACAGC 22707127 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | | ||||||| |||| | ||| || || | ||| || || | ||| || || Sbjct 22707126 AGTGAACCTCTCAGGCTTCTTCAGAAACTCCACTACCTCCATAAAGTCCTGTTTAGCTTC 22707067 Query 289326 ATCACATCCTGCTACATCAGCAAAAGT 289352 ||| || || |||||| |||| || Sbjct 22707066 ATCCACCCCAGCAACATCATCAAATGT 22707040 >seq3 Length=135057546 Score = 129 bits (142), Expect = 2e-24 Identities = 282/418 (67%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| ||| |||| ||||| ||||| ||||| ||||||||||| ||| Sbjct 130918777 AACCCATCCATTTCTGTCAAAAGCTGATTGAGTGTCTGTTCTCTTTCATCATTC---CCT 130918833 Query 289000 CTTGAATCACC----CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 | |||| | | || ||| ||| | | ||||||||||||||||| |||| ||| Sbjct 130918834 C------CACCAATTCCAGTCCCTC-TTTGTCTCCCAACAGCATCAATTTCATCAACGAA 130918886 Query 289056 AATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 | | || || | ||| | | | || | ||||| || | || | || || || Sbjct 130918887 CACAATGCAAGGGGCATTCTCTTTAGCCTTCTTGAATAAATCACGGACTCTTGAAGCACC 130918946 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTG 289174 | ||||||| |||| || ||||| |||||| | || | |||| | ||| | ||| | Sbjct 130918947 GATACCAACAAACATCTCAACAAACTCAGAACCTGAGA-TTGAGAAGAACGGAACACCAG 130919005 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 ||||||| || | ||| | |||| ||| ||||| || |||||||| ||||| | | | Sbjct 130919006 CTTCGCCAGCGATCGCCTTGGCCAAAAGGGTCTTCCCAGTTCCAGGAGGTCCAACAAGAA 130919065 Query 289235 GAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATT 289294 |||| |||||||||| || ||| ||| | | | ||||| |||| | ||| | Sbjct 130919066 GAACACCCTTTGGTATGCGAGCTCCAACAGCAGTGAACCTTTCAGGCTTCTTCAGAAACT 130919125 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | || | ||| || || | || || ||||| || || |||||| |||| || Sbjct 130919126 CCACTACCTCCATAAAATCCTGCTTAGCTTCATCCACCCCAGCAACATCATCAAACGT 130919183 Score = 118 bits (130), Expect = 3e-21 Identities = 223/320 (70%), Gaps = 10/320 (3%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| |||||||| |||||||| || || | || || | | || || || || | Sbjct 2688070 ACCAATTGCATCAATCTCGTCAATAAATATAATACTAGGGGCACACTGCCTTGC--TTCC 2688127 Query 289089 --AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||| || | |||||| | |||| ||||| ||||||| |||| || | ||| || ||| Sbjct 2688128 TGAAACAAGTTTCTTACCCTAGATGGTCCAACACCAACAAACATCTCCATAAAATCTGAA 2688187 Query 289147 GCGGATACTTGAATGAA-TGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | |||| | ||| ||| || ||| | ||| |||||| ||| | || | ||| || Sbjct 2688188 CCAGATA-TCGAAAGAAATGGAACACCAGATTCCCCTGCTGTTGCTTTTGCTAAAAGGGT 2688246 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 || ||||| ||||| || || | | ||| | ||||| || | ||||||||| || Sbjct 2688247 TTTTCCTGTGCCAGGAGGACCAACCAGGAGAGCACCCTTGGGGATTTTTGCCCCT--AGT 2688304 Query 289266 -CTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 ||| |||||||| ||| |||| | || | |||| ||| || ||| | |||||| Sbjct 2688305 TCTTCATATTTCTTTGGGTTCTTAAGGAAGTGGACAAACTCCATAATTTCTTGCTTTGCC 2688364 Query 289324 TCATCACATCCTGCTACATC 289343 |||||||| || || ||||| Sbjct 2688365 TCATCACAACCAGCAACATC 2688384 Score = 111 bits (122), Expect = 5e-19 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||||| ||| ||||| ||||| |||||||| | |||||| || | || Sbjct 112999555 TACCTTTCCTCTTGCCTCCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACCCGTA 112999496 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 ||||||||| |||||||||||| || ||||| ||||| || || | |||| | | Sbjct 112999495 GCATAGGAAGAATACCATTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCAC 112999436 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 ||| || |||| | | ||||| || |||| |||| || ||| || |||| Sbjct 112999435 GAATGTTGTGAACAGAAACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCT 112999376 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | | ||||| | || || || ||| |||||||| ||| Sbjct 112999375 TCAAAGTATCATATATTCCCTCTATACTATCATCTTTCAT 112999336 >seq9 Length=120672674 Score = 120 bits (132), Expect = 9e-22 Identities = 216/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 |||||| || |||||| ||| | | || | || || || |||||| ||| || || Sbjct 103936623 CATAATATCCTCCATAGCCTTCACAAGCCGCCTTTGGATGTATCCAGTTTCAGAGGTCTT 103936682 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || |||||||| | ||| | | ||| ||||| |||||||| || | ||||| || Sbjct 103936683 CACTGCAGTATCAATAACACCTTCCCTACCTCCCATGGCATGGAAAAAGAACTCTTGTGG 103936742 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 ||||| | || | | ||| |||| || || || || || ||| || || Sbjct 103936743 GGTCAGCCCTCGAAGATACGAGTTCTCCACAAAGCCTCGGCTTTCAGGCCCATAATCATC 103936802 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803 || |||||||||||||| ||||| | | | | | || |||| || ||||| || |||| Sbjct 103936803 TTTTGTAAAGTGTGGCAGTGTCCTATCTATGA-ACCCAAATGGAATTCGCTTGCCTTCAA 103936861 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863 | ||||| || || || || | | ||||||| || || || | | ||| || ||||| | Sbjct 103936862 CATTCTGTTGACCAAGACAAGCAGTCATCTGAGATATGTTGATAAAACTTCCTTTGGAAC 103936921 Query 302864 CAGCATTTACCAT 302876 |||| | ||||| Sbjct 103936922 CAGCTGTCACCAT 103936934 >seq6 Length=112752717 Score = 116 bits (128), Expect = 1e-20 Identities = 215/313 (69%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 |||||| || |||||| ||| | | || | || || || |||||| ||| || || Sbjct 107306499 CATAATATCCTCCATAGCCTTCACAAGCCGCCTTTGGATGTATCCAGTTTCAGAGGTCTT 107306440 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || |||||||| | ||| | | ||| ||||| || ||||| || | ||||| || Sbjct 107306439 CACTGCAGTATCAATAATACCTTCCCTACCTCCCATGGCGTGGAAAAAGAACTCTTGTGG 107306380 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 ||||| | || | | ||| |||| || || || || || ||| || || Sbjct 107306379 GGTCAGCCCTCGAAGATACGAGTTCTCCACAAAGCCTCGGCTTTCAGGCCCATAATCATC 107306320 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803 || |||||||||||||| ||||| | | | | | || |||| || ||||| || |||| Sbjct 107306319 TTTTGTAAAGTGTGGCAGTGTCCTATCTATGA-ACCCAAATGGAATTCGCTTGCCTTCAA 107306261 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863 | ||||| || || || || | | ||||||| || || || | | ||| || ||||| | Sbjct 107306260 CATTCTGTTGACCAAGACAAGCAGTCATCTGAGATATGTTGATAAAACTTCCTTTGGAAC 107306201 Query 302864 CAGCATTTACCAT 302876 |||| | ||||| Sbjct 107306200 CAGCTGTCACCAT 107306188 Score = 100 bits (110), Expect = 8e-16 Identities = 218/324 (67%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || || |||||||| || |||||||||| | || || | ||| | || | || Sbjct 18233678 CCCACGGCATCAATCTCATCAATGAAAACAATGCATGGCGCCTTTGACTTGGCTTTCTCA 18233619 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || || || || ||||| || |||| |||||| ||| || || || || ||||| Sbjct 18233618 AACAAATCCCTCACGCGGGAAGCACCAACCCCAACAAACAGCTCCACGAACTCCGAAGCC 18233559 Query 289150 GATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 | | || | ||| | ||| || || || || || |||| |||||||| ||||| Sbjct 18233558 GCG-CAAGAGAAGAACGGTACTCCGGCCTCACCGGCAACCGCCCGTGCCAGAAGGGTCTT 18233500 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 || ||||||||||| ||| | | ||| || ||||| | || || || || | Sbjct 18233499 CCCGGTTCCAGGTGGCCCCACCAGAAGACACCCTTTTGGGATCTTAGCACCCAAAGCGGT 18233440 Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 || || |||||| |||| | ||| || |||| ||||| ||||| || || | ||| Sbjct 18233439 GTACTTGTCAGGGTTCTTGAGAAAATCAACAACTTCCTGCAGTTCCAGCTTGGCTTGATC 18233380 Query 289329 ACATCCTGCTACATCAGCAAAAGT 289352 | ||||| || ||||| || || Sbjct 18233379 AGCGCCTGCGACGTCAGCGAAGGT 18233356 >seq8 Length=49462234 Score = 87.8 bits (96), Expect = 5e-12 Identities = 217/321 (68%), Gaps = 10/321 (3%) Strand=Plus/Minus Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 |||| | |||||||| || |||||||| | | || |||| | ||| || || || Sbjct 24998857 TACCTATTGCATCAATCTCATCAATGAATACTATACTTGGAGCACATTGCCTTGC--TTC 24998800 Query 289088 CA--AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 | || || ||| || | || | ||||| ||||||| |||| || | ||| ||||| Sbjct 24998799 CTGGAACAAGCTTCTCACCCTTGAGGGTCCAACACCAACAAACATCTCCAGAAAATCAGA 24998740 Query 289146 AGCGGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | |||| | || ||| | ||| | ||| ||||| ||| | || | |||| Sbjct 24998739 ACCAGATA-TAGATAGAAAAGGCACACCGGATTCCCCTGCAGTTGCTTTTGCTAAGAGTG 24998681 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 | || ||||| || || || || | | ||| | || ||||| | |||||| ||| || Sbjct 24998680 TTTTCCCTGTGCCTGGAGGCCCAACAAGAAGAGCACCTTTTGGAATTTTTGCACCA--AG 24998623 Query 289265 A-CTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGC 289322 ||| |||||||| || ||||||| || | |||| ||| | ||| | ||||| Sbjct 24998622 TTCTTCATATTTCTTTGGATTCTTTAAGAAATGCACAAACTCCATGATTTCTTGCTTTGC 24998563 Query 289323 CTCATCACATCCTGCTACATC 289343 ||||||||| || || ||||| Sbjct 24998562 CTCATCACACCCAGCAACATC 24998542 >seq7 Length=79126724 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 ||||||| | ||||| |||||||| || || | |||||||||| |||||||| ||| Sbjct 25509828 TTGCAAAGAGATCTCTCACACGGGAGGCACCCATGCCAACATACAACTCTACAAACTCAC 25509887 Query 289145 AAGCGGAT--ACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 |||||| |||| || |||| |||| || || || || ||||| | || || || Sbjct 25509888 TAGCGGAACAACTT--ATAAATGGCACATCAGCCTCCCCAGCCACTGCTTTTGCTAGTAG 25509945 Query 289203 TGTCTTACCTGTTCCAGG 289220 ||||||||||| ||||| Sbjct 25509946 AGTCTTACCTGTCCCAGG 25509963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471789181501859