Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 179 6e-39 seq5 91.5 2e-12 seq4 87.8 3e-11 >seq6 Length=112752717 Score = 179 bits (198), Expect = 6e-39 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || || |||||||||||||| | ||||| || ||||| ||||||||| Sbjct 97172558 GCCTCGGCGACCTGAACCTCCTTCATGAACCTTCCGGCAAGATTCTCCAGGACGATGCCG 97172617 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| ||||| |||||||| |||||||||| |||||| ||||| |||| Sbjct 97172618 TCGGATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGA 97172677 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 || |||||||| ||||| || ||||| || ||||| || ||||| || || ||| Sbjct 97172678 GATTCCCAGTGGCGGATGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCC 97172737 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 || || || |||||||| ||||||||| |||| |||| ||||||| Sbjct 97172738 TCCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACA 97172786 Score = 134 bits (148), Expect = 2e-25 Identities = 221/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 794347 TCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGC 794406 |||||| |||||| ||||| ||| | || ||||| | || ||||| || ||| Sbjct 97172242 TCGCGA--GATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACCCACGCTTTTTCAGC 97172299 Query 794407 CAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACG 794466 ||||| || | ||||| || || ||||| ||||| || |||||| ||| || ||||| Sbjct 97172300 CAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACGCAGGCGAACGCGACG 97172359 Query 794467 AGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCC 794526 | || || || || | || ||| || |||||| | |||||||| || Sbjct 97172360 ATGCGTTCCGCGAACGATTCTGAGCCATC------GATCCATCGTAGGGCCCACTCAGCT 97172413 Query 794527 TTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGG 794586 || ||| | || | || || || || || ||| | ||||| | | |||||| | | Sbjct 97172414 TTCTTCTTTACACAAGGAACGGTCTCAATTGCGTGGAAGAGACGATTCTTCTCTGATGAG 97172473 Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 || |||| ||| || |||| ||||| ||| |||||||||||||||| ||||| ||| Sbjct 97172474 TCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACATCTCTGAGTGGATGTTCTCGATTGCG 97172533 Query 794647 ATCTGGAAGCCATAAAAG 794664 ||||||||||| || ||| Sbjct 97172534 ATCTGGAAGCCGTAGAAG 97172551 Score = 96.9 bits (106), Expect = 5e-14 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| || || ||| || || ||||||||||| |||| ||||| || | ||||||| Sbjct 97171928 TACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGCTCCATC 97171987 Query 793968 CACGGGAACGGGT--TGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 || || |||| || | | ||| ||||| |||||| |||| | | |||| | Sbjct 97171988 CAATCAAAAGGGTTCTGAACAT--TGTACACCTTCTTGCACCCAAGCGCCACCAGCAACC 97172045 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085 | || || ||||| ||||| ||||| | ||| ||| | ||||||| || | | ||| Sbjct 97172046 GATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCAACGCGC 97172105 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 || |||| |||| |||||||| |||| || || ||||| || Sbjct 97172106 AAGGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTC 97172151 >seq5 Length=110037037 Score = 91.5 bits (100), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||| || |||| ||||| || | || || || || |||||| | |||||||| Sbjct 7277338 AGGTCGATCAGGCCACGCTCTTCGATCTCATTCTGGCTGCAAACTACTTGAACATCAAGA 7277397 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| | || | ||| |||| ||||| || | |||||||||||| | || |||| Sbjct 7277398 GCCTCTTGGACCTTACTTGCCAGACAGTGGCAGACATGATCAAGGGCAAGACTCCGGAGG 7277457 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || |||||||| || || |||||| ||| Sbjct 7277458 AGATTCGCAAGACGTTCAATATCAAGAACG 7277487 >seq4 Length=123556382 Score = 87.8 bits (96), Expect = 3e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||| || |||| ||||| || | || || || || |||||| | |||||||| Sbjct 116944426 AGGTCGATCAGGCCACGCTCTTCGATCTCATTCTGGCTGCAAACTACTTGAACATCAAGA 116944367 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| | || | ||| |||| ||||| || | |||||||||||| | || |||| Sbjct 116944366 GCCTCTTGGACCTTACTTGCCAGACAGTGGCAGACATGATCAAGGGCAAGACTCCGGAGG 116944307 Query 2035732 ACATCCGCAAGACCTTTAACATCAAG 2035757 | || |||||||| || || |||||| Sbjct 116944306 AGATTCGCAAGACATTCAATATCAAG 116944281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916086093536573