Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 1e-15 seq740 93.3 2e-14 seq459 93.3 2e-14 seq6 93.3 2e-14 seq7 80.6 1e-10 >seq4 Length=123556382 Score = 96.9 bits (106), Expect = 1e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 40023611 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 40023552 Query 50170 CTGCTCTACTCCGCATTA 50187 ||||||||| ||||| || Sbjct 40023551 CTGCTCTACCCCGCAGTA 40023534 Score = 96.9 bits (106), Expect = 1e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 40027324 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 40027383 Query 50170 CTGCTCTACTCCGCATTA 50187 ||||||||| ||||| || Sbjct 40027384 CTGCTCTACCCCGCAGTA 40027401 >seq740 Length=20415 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 19295 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 19236 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 19235 CTGCTCTACCCCGC 19222 >seq459 Length=51653 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 49581 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 49640 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 49641 CTGCTCTACCCCGC 49654 >seq6 Length=112752717 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 13188593 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 13188652 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 13188653 CTGCTCTACCCCGC 13188666 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | Sbjct 95765787 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 95765846 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 95765847 CTGCTCTACCCCGC 95765860 >seq7 Length=79126724 Score = 80.6 bits (88), Expect = 1e-10 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 50115 GGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCT 50174 |||| ||||||||||||||| | |||| ||| ||||||||| |||||||||| | ||||| Sbjct 13540952 GGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAGCTGCT 13540893 Query 50175 CTACTCC 50181 |||| || Sbjct 13540892 CTACCCC 13540886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181599950097234