Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 3e-11 seq5 82.4 1e-10 >seq6 Length=112752717 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 51969 AATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACAT 52028 |||||| | | ||||| | |||||||||||||||||||||||||||||||| | ||| Sbjct 107304984 AATTTGTCGGTAACTAAGCCTTATAATGCTGATTTTGATGGGGATGAAATGAACATGCAT 107305043 Query 52029 GTTCCTCAATCATATG 52044 |||||||| |||| || Sbjct 107305044 GTTCCTCAGTCATTTG 107305059 >seq5 Length=110037037 Score = 82.4 bits (90), Expect = 1e-10 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATG 52044 ||||||||||||||||||||||||||||||||| | ||||||||||| |||| || Sbjct 4028024 TATAATGCTGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCATTTG 4027970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635165634841960