Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 1e-11 seq6 86.0 1e-11 >seq9 Length=120672674 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| ||| || | ||||| || ||| | || || || ||||||||||| Sbjct 103938252 CATTTGATGGACGGAGACTTAGTTCTCTTGAATCGTCAGCCTAGTCTTCATAAAATGTCC 103938193 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 || |||| || | | ||||| | | || | || ||||| | ||| | || Sbjct 103938192 ATTATGGGGCACAGAATCAAAATCATGCCTTATTCTACGTTTCGGCTTAATTTGTCGGCA 103938133 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 || |||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct 103938132 ACTAAGCCTTATAATGCTGATTTTGATGGGGATGAAATGAACATGCATGTTCCTCAGTCA 103938073 >seq6 Length=112752717 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||| ||| || | ||||| |||||| | || || || ||||||||||| Sbjct 107304876 CATTTGATGGACGCAGACTTAGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGTCC 107304935 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCT 305428 || |||| || | | ||||| | | || | || ||||| | ||| | | Sbjct 107304936 ATTATGGGGCACAGAATCAAAATCATGCCTTATTCTACGTTTCGGCTTAATTTGTCGGTA 107304995 Query 305429 TGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 || |||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||| Sbjct 107304996 ACTAAGCCTTATAATGCTGATTTTGATGGGGATGAAATGAACATGCATGTTCCTCAGTCA 107305055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186789884499227