Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3 122 6e-23 seq5 116 2e-21 seq6 109 4e-19 seq4 96.9 2e-15 >seq3 Length=135057546 Score = 122 bits (134), Expect = 6e-23 Identities = 173/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||||||||| | |||||| || || || ||| || || ||| Sbjct 22723271 AAAATCTGCATGCCACCTCTCAAACGGAGCACCAAGTGAAGCGTTGACTCCTTCTGAATG 22723330 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | ||||| | | | || || | || || || ||||||||||| | |||| Sbjct 22723331 TTGTAATCTGCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGC 22723390 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||| |||||||| ||||| | || |||| ||| | |||||| Sbjct 22723391 TGGTCAGGTGGGATACCCTCTTTGTCTTGGATTTT-GGCTTTGACATTGTCAATGGTGTC 22723449 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || | ||||| ||||| || || || || ||||| || || ||||| Sbjct 22723450 CGAGGATTCCACCTCTAAGGTGATGGTTTTCCCAGTCAAGGTCTTTACGAAAATTTGCAT 22723509 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || ||||||||||||| |||| ||| || || || |||||||| | || || | | | Sbjct 22723067 CGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTTCCA 22723126 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || |||||||| || | | |||||||||| | || | || || ||| Sbjct 22723127 TCTTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTG 22723186 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||| || |||| |||| ||| | ||| || |||||||| || | || || Sbjct 22723187 TCCTGAATCTTAGCTTTC-ACATTGTCAATGGTATCAGAGGATTCCACCTCTAGTGTTAT 22723245 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || ||||| || || || ||||| |||||||| Sbjct 22723246 GGTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 22723281 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| ||||| | |||||| || || ||| || || || ||||||||||||| Sbjct 22723511 CCACCTCTTAAACGAAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGCA 22723570 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | |||||||||||||||||| | | ||||| || | || Sbjct 22723571 AGGGTTCTACCATCTTCAAGTTGTTTTCCGGCAAAAATAAGCCTTTGCTGGTCAGGAGGG 22723630 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || |||||| | | |||| || | || ||| |||||| Sbjct 22723631 ATTCCTTCTTTATCCTGAATTTT-GGCCTTGACATTATCAATTGTATCGGAACTTTCCAC 22723689 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 22723690 CTCAAGGGTGATGGTCTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 22723737 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | || || || | ||| | ||| ||| || || ||||||||||| | Sbjct 22722827 CCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCA 22722886 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || ||||| || || || ||||| || | | ||||||||| | || Sbjct 22722887 AGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGATCAGGTGGG 22722946 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| |||||||| ||||| || || |||| ||| | ||||| ||||| || Sbjct 22722947 ATACCCTCTTTGTCTTGGATTTT-TGCTTTGACATTGTCAATTGTGTCCGAAGATTCGAC 22723005 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || || || |||| || || |||||||| ||||| Sbjct 22723006 CTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 22723053 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| |||| ||| ||||| |||| || | || || ||||| || Sbjct 124352721 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 124352662 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| || | || | ||||| ||||| || || || | | | Sbjct 124352661 ATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 124352603 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||||| || ||||| || | ||||| || || || |||| ||||| || Sbjct 124352602 GTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCAC 124352543 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 124352542 GAAGATCTGCAT 124352531 >seq5 Length=110037037 Score = 116 bits (128), Expect = 2e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 |||| || | ||| || ||| ||||| || ||||||||||||| ||||||||| || Sbjct 23423257 CGTAGGACGAGATGGAGCGTGGATTCTTTCTGGATGTTGTAATCGGCGAGTGTGCGGCCG 23423198 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || |||||||| || || | |||||||| || |||| | ||||||||| Sbjct 23423197 TCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCTTTG 23423138 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || || || ||| || | ||| | ||||||| |||||||| |||| ||||| Sbjct 23423137 TCTTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGAT 23423079 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || |||| ||||| || || |||||||| Sbjct 23423078 GGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 23423043 >seq6 Length=112752717 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| ||||| ||||||||||||| ||| ||||| | || || | ||| Sbjct 25200233 TGGAGCGTGGACTCCTTTTGAATGTTGTAATCGGCGAGGGTGCGACCATCCTCTAGCTGT 25200292 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||||||||| | || | ||||||||||| ||| || Sbjct 25200293 TTCCCGGCGAAGATGAGTCGCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGAATCTTG 25200352 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| || | ||| | |||||| ||||| || || | |||||||| || || || Sbjct 25200353 GCCTTC-ACGTTGTCGATTGTGTCGGAGGATTCAACCTCCAGAGTGATCGTCTTTCCGGT 25200411 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 25200412 TAGGGTTTTGACGAAGATCTGCAT 25200435 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || || || || |||| || ||||| |||| || | || Sbjct 25200461 TGGAGCGTGGACTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGC 25200520 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||||||||| || |||| | ||||| ||||| || || Sbjct 25200521 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTA 25200580 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | ||| ||| || ||||| || | || ||||| || ||||| Sbjct 25200581 GCCTTCA-CATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGT 25200639 Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750 || ||||| || |||||||||||| Sbjct 25200640 TAGGGTTTTCACGAAGATCTGCATA 25200664 >seq4 Length=123556382 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| |||| ||| ||||| |||| |||| || || ||||| || Sbjct 120131235 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 120131294 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| || | || | ||||| ||||| ||| || |||| | | Sbjct 120131295 ATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTCA-CGTT 120131353 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||||| || ||||| || | ||||| || || || |||| ||||| || Sbjct 120131354 GTCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCGTTAGGGTTTTCAC 120131413 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 120131414 GAAGATCTGCAT 120131425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697962837440