Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 seq3 89.7 5e-13 >seq6 Length=112752717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||| ||| | ||| || ||| || |||||||| |||| Sbjct 25200242 GACTCCTTTTGAATGTTGTAATCGGCGAGGGTGCGACCATCCTCTAGCTGTTTCCCGGCG 25200301 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| ||||||||||| || ||| || |||| Sbjct 25200302 AAGATGAGTCGCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGAATCTTGGCCTTCACG 25200361 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | || || || | || | ||| || || || || ||||| Sbjct 25200362 TTGTCGATTGTGTCGGAGGATTCAACCTCCAGAGTGATCGTCTTTCCGGTTAGGGTTTTG 25200421 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 25200422 ACGAAGATCTGCATG 25200436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| |||||||||||||| ||| || || || || || Sbjct 25199772 AACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCCAGAGTGCGTCCGTCCTC 25199831 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | ||||||||||||| || || || || || || ||| | | || Sbjct 25199832 AAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCCTCTGT-CCTGT 25199890 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || ||| |||| | || | |||||| | |||||| || | ||| | ||| || Sbjct 25199891 -ATCTTTGCCTTCACATTATCAATAGTATCAGAACTCTCCACCTCTAGCGTTATCGTCTT 25199949 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || | |||||||||||| Sbjct 25199950 CCCGGTTAGAGTCTTCACGAAAATCTGCAT 25199979 >seq3 Length=135057546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||| | |||||| ||| || |||||||| |||| Sbjct 124959910 TTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCATCCTCCAGCTGTTTTCCGG 124959969 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||||||||||| || || ||||| || ||||| ||||| |||||| Sbjct 124959970 CGAAGATTAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTATCTTGAATTTT 124960021 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||||||||| | ||||| || ||||| ||||| || | || | | Sbjct 22723067 CGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTTCCA 22723126 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||||| | |||| || | ||| |||||||| || ||||| || || Sbjct 22723127 TCTTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTG 22723186 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||||| | || | ||||| | | ||||| || | || | Sbjct 22723187 TCCTGAATCTTAGCTTTCACATTGTCAATGGTATCAGAGGATTCCACCTCTAGTGTTATG 22723246 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || |||| ||| || | |||||||||||| Sbjct 22723247 GTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCATG 22723282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476602221836520