Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 >seq6 Length=112752717 Score = 143 bits (158), Expect = 2e-29 Identities = 568/877 (65%), Gaps = 25/877 (3%) Strand=Plus/Minus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| ||||| ||||| | ||| |||||| |||||||||| ||||| |||| || || | Sbjct 97172786 TGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCATCGTTCT 97172727 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCAT-TAAAACC- 43824 ||||||| || |||||||| | | ||| | || ||| | || | ||| Sbjct 97172726 GGACAGCGGAGGAAGTTGACCTTTCCGGCGACATCCGCCACTGG---GAATCTCTCACCG 97172670 Query 43825 ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 || || || ||||| || || | || || || || || |||||| || | Sbjct 97172669 ACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGACGGCATCG 97172610 Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943 || || ||| | | | |||| | | || ||||| | | || ||||| | Sbjct 97172609 TCCTGGAGAATCTTGCCGGAAGGTTCATGAAGGAGGTTCAGGTCGCCGAGGCACGCGCCT 97172550 Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003 | || || || || || || || || || || || || || |||||||| || || | | Sbjct 97172549 TCTACGGCTTCCAGATCGCAATCGAGAACATCCACTCAGAGATGTACAGCCTCCTTCTCG 97172490 Query 44004 ATACGTACATCAAAGA-TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062 | || ||||||||||| | || |||||| |||| | || | || || || || || Sbjct 97172489 AAACTTACATCAAAGACTCATCA-GAGAAGAATCGTCTCTTCCACGCAATTGAGACCGTT 97172431 Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT---TCAAATGATTCT 44119 ||| | || | ||||| || |||||||| |||||| || ||| || || Sbjct 97172430 CCTTGTGTAAAGAAGAAAGCTGAGTGGGCCCTACGATGGATCGATGGCTCA---GAATCG 97172374 Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT-TTCAGGATCGTT 44178 || | ||||| | |||||||| || || ||||| || ||||| | | ||| | | Sbjct 97172373 TTCGCGGAACGCATCGTCGCGTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGGAGCTTC 97172314 Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238 ||| | ||||||||| | || || || || || ||||| || || || || || || || Sbjct 97172313 TGC-TCGATATTTTGGCTGAAAAAGCGTGGGTTAATGCCAGGTTTAACCTTCTCGAACGA 97172255 Query 44239 GTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG--TTACTTGGATAT 44296 ||| || || ||||||||| | || |||||||| || |||||| |||| | | Sbjct 97172254 GTTGATCTCGCGAGATGAAGGCCTCCACTGCGATTTCGCGTGCTTGCTGTACTCTCTTCT 97172195 Query 44297 CTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAG 44356 | ||| | | || | | | || | | | || || || || || | Sbjct 97172194 GAGGAAGAAGCT---CCCTGAGG--AGCGTGTGAAGGGGATCGTGAAGGACGCCGTGGAT 97172140 Query 44357 ATAGAACAAGAATTTATG-ACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACT 44415 ||||| || ||| || | || || | ||| || |||||||||| | | Sbjct 97172139 ATAGAGAGGGAGTTTGTGTGCGAC-GCGCTTCCTTGCGCGTTGGTAGGAATGAACGGAGA 97172081 Query 44416 TTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGA 44475 |||||| || |||||||| | | |||||||||| || || ||| || || ||| | Sbjct 97172080 CCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGCGCTTGGGTGCAA 97172021 Query 44476 TAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAA 44535 || || | ||| || ||||| ||||||| ||||| ||||||| | | || || Sbjct 97172020 GAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAA 97171961 Query 44536 AACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572 || ||||| |||||||| || ||||| || || ||| Sbjct 97171960 GACCAACTTCTTTGAAAAGCGTGTTGGGGAGTACCAG 97171924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397448700099535