Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 156 5e-33 >seq6 Length=112752717 Score = 156 bits (172), Expect = 5e-33 Identities = 557/858 (65%), Gaps = 26/858 (3%) Strand=Plus/Minus Query 59574 TACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAG 59633 ||||| || | |||| |||| ||||||||| | || |||||| | | ||||| Sbjct 97172772 TACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCATCGTTCTGGACAGCGGAGGAA 97172713 Query 59634 ATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTC 59693 ||||||| |||| ||| | | ||||| |||| ||| ||||| || || Sbjct 97172712 GTTGACCTTTCCGGCGACATCCGCCACTGGGAATCTCTCACCGACGGCGAGCGCCACTTT 97172653 Query 59694 ATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGAC 59753 |||| ||||| ||||||||||| || || || || || |||| ||| | | | Sbjct 97172652 ATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGACGGCATCGTCCTGGAGAATCTTGCC 97172593 Query 59754 ATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TC 59812 | || ||||| || ||| | |||||||| || | ||||||| | ||| || Sbjct 97172592 GGAAGGTTCATGAAGGAGGTTCAGGTCGCCGAGGCACGCGCCTTCTACGGCTTCCAGATC 97172533 Query 59813 GTTCAA-CGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGG 59871 | ||| |||| |||||||| |||| |||| ||| | |||| | | |||| | Sbjct 97172532 G--CAATCGAGAACATCCACTCAGAGATGTACAGCCTCCTTCTCGAAACTTACATCAAAG 97172475 Query 59872 ATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC-GTCCCCCGCAGTTAAACAA 59930 | | ||||||| | |||| |||| || || ||||| || || | || || | Sbjct 97172474 ACTCATCAGAGAAGAATCGTCTCTTCCACGCAATTGAGACCGTTCCTTGT-GTAAAGAAG 97172416 Query 59931 AAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCAT 59989 ||||| || |||||| | | ||||| || || || ||| || || |||| || | Sbjct 97172415 AAAGCTGAGTGGGCCCTACGATGGATCGATGGCTC-AGAATCGTTCGCGGAACGCATCGT 97172357 Query 59990 AGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 || || || ||||| ||||| ||||||||||| || ||||| | || || ||||| Sbjct 97172356 CGCGTTCGCCTGCGTCGAAGGGATCTTCTTCTCCGGGAGCTTCTGCTCGATATTTTGGCT 97172297 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGA 60109 ||||||||||| | ||||| || | | ||||| |||||| |||| || || || || Sbjct 97172296 GAAAAAGCGTGGGTTAATGCCAGGTTTAACCTTCTCGAACGAGTTGATCTCGCGAGATGA 97172237 Query 60110 GGGCCTCCATCAGGAGTTTGCAGTG-ACGCTCTATTCACACCTATTGGAAAAATGCCCTT 60168 |||||||| || || || ||| ||| || || | || | | || |||| Sbjct 97172236 AGGCCTCCACTGCGATTTCGC-GTGCTTGCTGTACTCTCTTCTGAGGAAGAAGCTCCCTG 97172178 Query 60169 CCAAGGATATTCACAAGATTGTTCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAG 60228 || | | | ||| || || || || | ||||| ||||| | | Sbjct 97172177 AGGAGCGTGTGAAGGGGATCGTGAAGGACGCCGTGGATATAGAGAGGGAGTTTGTGTGCG 97172118 Query 60229 AAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA---AATGACGCAGTACATTC 60285 | |||||||| ||| | |||| ||| || ||||| |||| ||||| ||| Sbjct 97172117 ACGCGCTTCCTTGCGCGTTGGTAGGAATGAAC---GGAGACCTGATGAGTCAGTATATTG 97172061 Query 60286 AGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG-----AGAAGGACCAATTTACGGCGT 60340 |||| || || || || | ||| | |||| |||||| | ||| || Sbjct 97172060 AGTTCGTTGCAGATCGGTTGCTGGTGGCGCTTGGGTGCAAGAAGG-----TGTACAATGT 97172006 Query 60341 GAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGA 60400 | |||||||| || ||||||||| || ||| | | |||||||||||||||||||| Sbjct 97172005 TCAGAACCCTTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAAGACCAACTTCTTTGA 97171946 Query 60401 GAAGCGGGTCGGGGATTA 60418 ||||| || ||||| || Sbjct 97171945 AAAGCGTGTTGGGGAGTA 97171928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548514467164080