Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq706 80.6 7e-11 seq9 80.6 7e-11 seq1 80.6 7e-11 >seq706 Length=21992 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316 ||| | ||| ||||||||||||| |||||| ||| | ||||| ||| ||||||||||||| Sbjct 6036 CTGGGACGGAAGGATTCGAACCTCCGAATGGCGGGACCAAAACCCGATGCCTTACCGCTT 5977 Query 31317 GGCGACG 31323 ||||||| Sbjct 5976 GGCGACG 5970 >seq9 Length=120672674 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316 ||| | ||| ||||||||||||| |||||| ||| | ||||| ||| ||||||||||||| Sbjct 6924055 CTGGGACGGAAGGATTCGAACCTCCGAATGGCGGGACCAAAACCCGATGCCTTACCGCTT 6923996 Query 31317 GGCGACG 31323 ||||||| Sbjct 6923995 GGCGACG 6923989 >seq1 Length=107035537 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 31257 CTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCGCTT 31316 ||| | ||| ||||||||||||| |||||| ||| | ||||| ||| ||||||||||||| Sbjct 25858498 CTGGGACGGAAGGATTCGAACCTCCGAATGGCGGGACCAAAACCCGATGCCTTACCGCTT 25858557 Query 31317 GGCGACG 31323 ||||||| Sbjct 25858558 GGCGACG 25858564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138195926853258