Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq459 84.2 7e-12 seq6 84.2 7e-12 seq4 84.2 7e-12 seq740 82.4 2e-11 >seq459 Length=51653 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 49653 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 49594 Query 21210 CTGTCTCCGCAACCAGTT 21227 | |||||||||| ||||| Sbjct 49593 CCGTCTCCGCAA-CAGTT 49577 >seq6 Length=112752717 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 13188665 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 13188606 Query 21210 CTGTCTCCGCAACCAGTT 21227 | |||||||||| ||||| Sbjct 13188605 CCGTCTCCGCAA-CAGTT 13188589 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 95765859 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 95765800 Query 21210 CTGTCTCCGCAACCAGTT 21227 | |||||||||| ||||| Sbjct 95765799 CCGTCTCCGCAA-CAGTT 95765783 >seq4 Length=123556382 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 40023539 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 40023598 Query 21210 CTGTCTCCGCAACCAGTT 21227 | |||||||||| ||||| Sbjct 40023599 CCGTCTCCGCAA-CAGTT 40023615 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 40027396 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 40027337 Query 21210 CTGTCTCCGCAACCAGTT 21227 | |||||||||| ||||| Sbjct 40027336 CCGTCTCCGCAA-CAGTT 40027320 >seq740 Length=20415 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 19223 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 19282 Query 21210 CTGTCTCCGCAAC 21222 | ||||||||||| Sbjct 19283 CCGTCTCCGCAAC 19295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162521891517126