Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6 179 3e-40 seq1 82.4 7e-11 >seq6 Length=112752717 Score = 179 bits (198), Expect = 3e-40 Identities = 582/895 (65%), Gaps = 9/895 (1%) Strand=Plus/Plus Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331 || |||||||| ||||| || || || || | | ||||||| ||||| ||||||| Sbjct 97171937 ACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGCTCCATCCAATCAAAA 97171996 Query 4332 GGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACA 4391 || || | ||||| || | ||| || || || ||||| || || || || Sbjct 97171997 GGGTTCTGAACATTGTACACCTTCTTGCACCCAAGCGCCACCAGCAACCGATCTGCAACG 97172056 Query 4392 AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT-CTCACAGGTAGCGC 4450 || || |||||||| ||||| || || | ||| ||||| | || | || ||| ||||| Sbjct 97172057 AACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCAACGCGCA-AGGAAGCGC 97172115 Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC 4510 || || |||||| |||||| ||||| || | | || | || | || Sbjct 97172116 GTCGCACACAAACTCCCTCTCTATATCCACGGCGTCCTTCACGATCCCCTTCACACGCTC 97172175 Query 4511 TTTAGATGGTTTATTTACTAAGTATCCAA-ACAATAAACACGCAAAATCACAATGCAAAC 4569 | || | || || || || | | ||| || ||||| ||||| || || | | Sbjct 97172176 CTCAGGGAGCTTCTTC-CTCAGAAGAGAGTACAGCAAGCACGCGAAATCGCAGTGGAGGC 97172234 Query 4570 CTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTT 4628 |||| |||| || | |||| ||||| || || ||||| || |||||||| || | |||| Sbjct 97172235 CTTCATCTC-GCGAGATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACCCACGCTTT 97172293 Query 4629 TTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688 || ||||||||||| | | || ||| || ||||| || ||||| ||| ||| ||| Sbjct 97172294 TTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAC 97172353 Query 4689 GCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748 || || | || | ||||||| || | | | |||||| || ||||| | | Sbjct 97172354 GCGACGATGCGTTCCGCGAACGA---TTCTGAGCCATCGATCCATCGTAGGGCCCACTCA 97172410 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAAT 4808 ||||| ||||| || || |||| || | || |||| || | | | || || || Sbjct 97172411 GCTTTCTTCTTTACACAAGGAACGGTCTCAATTGCGTGGAAGAGACGATTCTTCTCTGAT 97172470 Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 | ||||| || ||||| || | || ||||| ||||| || || || || || || || Sbjct 97172471 GAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACATCTCTGAGTGGATGTTCTCGATT 97172530 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 || ||||| || ||||| ||| | || || | || ||||| || || || ||| Sbjct 97172531 GCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGCGACCTGAACCTCCTTCATGAACCTT 97172590 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 | | | || || || || ||||| || || || || || | || |||| Sbjct 97172591 CCGGCAAGATTCTCCAGGACGATGCCGTCGGATGCGGCGAAGAAGGCAAGGACGTGAGTG 97172650 Query 4989 ATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCA 5048 ||||||| | ||| | | || || ||||||| | | || | | ||| Sbjct 97172651 ATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCAGTGGCGGATGTCGCCGGAAAGGTCA 97172710 Query 5049 ACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGA 5108 ||||| || | ||||| ||||| || |||||||| |||||||| ||| || ||||| Sbjct 97172711 ACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTTCTTGTACATTTCCCATATCTCAGGG 97172770 Query 5109 TACTGAATCGGAAGTATGACAAATCTGTTGTCGTTAGGTGTAAGAAGCGGTTCTT 5163 || || || || | ||| ||||||| ||| || | ||| || || |||| Sbjct 97172771 TATTGGATTGGGAACATGCAGAATCTGTCAGGGTTTGGAGCAAGGAGTGGCTCTT 97172825 >seq1 Length=107035537 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || ||||| |||||||| | || || ||||| || || || || ||||| || || Sbjct 97981414 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATTAGCTCATTTGAAAATGTCAAA 97981355 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGC 4645 || |||||||| ||||||||||||||||| |||||||| Sbjct 97981354 CCTGGCATTAATCCTCTCTTTTTAAGCCAGAATATAGC 97981317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427041756566831