Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 seq6 84.2 2e-11 >seq1 Length=107035537 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| |||||||| || || ||||| ||| || | ||||| |||||||| || Sbjct 97981414 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATTAGCTCATTTGAAAATGTCAAA 97981355 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA 23607 |||||||||||||||| ||||||| ||| ||||| ||| Sbjct 97981354 CCTGGCATTAATCCTCTCTTTTTAAGCCAGAATATAGCA 97981316 >seq6 Length=112752717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 231/347 (67%), Gaps = 9/347 (3%) Strand=Plus/Plus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 || || || ||||| || || ||||||||||| | ||||| || || || || ||| Sbjct 97172210 AAGCACGCGAAATCGCAGTGGAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTT 97172269 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCGGAAAA 23624 || ||||||||||| || || ||||| | ||||||||| | |||| | | | ||||| || Sbjct 97172270 AAACCTGGCATTAACCCACGCTTTTTCAGCCAAAATATCG-AGCAGAAGCTCCCGGAGAA 97172328 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTAT-AAT 23683 ||| || || || || || || || || | ||| | || | ||| | | Sbjct 97172329 GAAGATCCCTTCGACGCAGGCGAACGCGACGATGCGTTCCGCGAACG----ATTCTGAGC 97172384 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 || |||||| | | ||| | ||| ||| |||||||| || || ||||||| Sbjct 97172385 CATCGATCCATCGTAGGGCCCACTCAGCTTTCTTCTTTACACAAGGAACGGTCTCAATTG 97172444 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTA-TCTGTTATATATGTATCAATTAGTAAACTA 23802 | | |||||| | | || || | || | ||| | || || || || | || | || Sbjct 97172445 CGTGGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTG 97172503 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAA 23849 ||||| || || || || || || || || ||||| || || || || Sbjct 97172504 TACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAA 97172550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478176469800