Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 165 2e-35 seq5 105 1e-17 seq4 105 1e-17 seq2 104 5e-17 seq10 100 6e-16 seq9 98.7 2e-15 seq7 98.7 2e-15 seq3 98.7 2e-15 seq1 98.7 2e-15 >seq6 Length=137147148 Score = 165 bits (182), Expect = 2e-35 Identities = 581/887 (66%), Gaps = 33/887 (4%) Strand=Plus/Minus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| ||||||||||||||| || || || ||||| ||||||||||| |||| |||| Sbjct 120288150 TCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCAT 120288091 Query 229811 CTTTCTGGACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAAC 229870 | |||||||| | ||||||||| || || ||| || | ||||| || | Sbjct 120288090 CGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACCTCCGCCACTGG---GAATCTC 120288034 Query 229871 TCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATG 229930 ||| |||| ||| || || || |||| ||| |||| | || ||||| | ||||||| Sbjct 120288033 TCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGATG 120287974 Query 229931 GTATTGTGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGGC 229988 | || || |||| ||||| || | || || || ||| || ||| | ||||| Sbjct 120287973 GCATCGTCCTGGAGAATCTCGCCGG--AAGGTTCATGAAGGAGGTTCAGGTCTCCGAGGC 120287916 Query 229989 ACGGCAATTTTATGCTTACCAAA---CATTCAACGAATCTATCCATTCTGAACAATATGC 230045 ||| || || | | ||| | || || | ||| ||||| || || || Sbjct 120287915 ACGCGCCTTCTACGGCTTCCAGATCGCAATCGA-GAAC--ATCCACTCAGAGATGTACAG 120287859 Query 230046 TCTGCTTATCGACGCGCTTATTTCC--GACG-AGCA-AGAACGGAACGAGCTTTTTGATG 230101 || ||| |||| | ||| || ||| | || |||| ||| || || | | Sbjct 120287858 CCTCCTTCTCGAAAC--TTACATCAAAGACTCATCAGAGAA--GAATCGTCTCTTCCACG 120287803 Query 230102 CCATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAAC 230161 | ||||| | | | || || | || || || ||||||| | |||| | || Sbjct 120287802 CAATTGAGACCGTTCCTTGCGTAAAGAAGAAAGCCGAGTGGGCCCTACGATGGATCGA-- 120287745 Query 230162 CTGGTA---AATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGT 230218 ||| ||||||| || || || ||||||| | | ||||| ||||| || | | Sbjct 120287744 -TGGCTCAGAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGTGTCGAAGGGATCTTCT 120287686 Query 230219 TTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCG 230278 | |||||||| |||||| | || ||||||||| || || | ||||| || | Sbjct 120287685 TCTCCGGGAGCTTCTGCTCGATATTTTGGCTGAAAAAGCGCGGGTTAATGCCAGGTTTAA 120287626 Query 230279 GTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA 230338 | || |||||||| ||| || || || || || || | |||| || |||| Sbjct 120287625 CCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCG-CGTGCTTG 120287567 Query 230339 -TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAA 230397 |||| || || || ||||| || ||| || || ||| | | || Sbjct 120287566 CTGTACTCTCTTCTGAGAAAGAAGCTGCCTGAGGAGCGTGTGAAGGGGATCGTGAAGGAC 120287507 Query 230398 GCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCAT 230456 || || || | || | |||||| | || ||||| |||| || ||| || | || || Sbjct 120287506 GCCGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTG-CGCGTTGGTAGGAAT 120287448 Query 230457 GAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACT 230516 ||||| || || ||| | ||||| || || ||||| || || || | | || || || Sbjct 120287447 GAACGGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGCGCT 120287388 Query 230517 TGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCT 230576 ||| | | |||| |||||||| | ||||||| |||| | ||||| || |||||||| Sbjct 120287387 TGGGTGCAAGAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAACTTATTTCGCT 120287328 Query 230577 TCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 ||| ||||||||||||||||| ||||||||||| | || || |||| Sbjct 120287327 TCAGGGGAAGACCAACTTCTTTGAAAAGCGTGTTGGGGAGTACCAGA 120287281 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 4439759 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4439818 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4439819 CCCACGGTGGGC 4439830 >seq5 Length=149900536 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 132381917 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 132381858 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 132381857 CCCCACGGTGGGC 132381845 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 13879429 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13879488 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13879489 CCCACGGTGGGC 13879500 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 137937105 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 137937046 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 137937045 CCCACGGTGGGC 137937034 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 5368454 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5368513 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5368514 CCCCACGGTGGGC 5368526 >seq4 Length=133615181 Score = 105 bits (116), Expect = 1e-17 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 165704 ACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT 165763 || ||||||||||||||||||| |||||||||| || || |||| || |||||||||||| Sbjct 114073906 ACACTTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGT 114073847 Query 165764 TCGAGCCCCACGATGGGC 165781 |||||||||||| ||||| Sbjct 114073846 TCGAGCCCCACGGTGGGC 114073829 >seq2 Length=108997779 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 100198227 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 100198168 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 100198167 CCCACGGTGGGC 100198156 >seq10 Length=136175642 Score = 100 bits (110), Expect = 6e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || ||||||||||||||| Sbjct 28150221 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 28150280 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 28150281 AGCCCCACGGTGGGC 28150295 >seq9 Length=147089397 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4230754 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4230695 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4230694 CCCACGGTGGGC 4230683 >seq7 Length=126351151 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 13321355 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13321414 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13321415 CCCACGGTGGGC 13321426 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 13321503 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13321562 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13321563 CCCACGGTGGGC 13321574 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 121018981 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 121019040 Query 165769 CCCCACGATGGG 165780 ||||||| |||| Sbjct 121019041 CCCCACGGTGGG 121019052 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3621125 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3621184 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3621185 CCCACGGTGGGC 3621196 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||| ||| Sbjct 3621288 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAGC 3621347 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3621348 CCCACGGTGGGC 3621359 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||| ||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 135391705 GCCCGTTTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 135391646 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 135391645 CCCACGGTGGGC 135391634 >seq1 Length=137414913 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 34684657 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 34684598 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 34684597 CCCACGGTGGGC 34684586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816572753240