Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 seq3 111 1e-19 seq6 107 2e-18 seq9 104 2e-17 seq5 98.7 8e-16 seq8 91.5 1e-13 >seq4 Length=133615181 Score = 118 bits (130), Expect = 9e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| || ||||||||||||| ||||| Sbjct 130208353 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 130208412 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| ||||| ||| Sbjct 130208413 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTC 130208472 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| |||| ||| |||||||| || |||| ||| Sbjct 130208473 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCGTTAGGGTT 130208532 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || || ||||| || Sbjct 130208533 TTCACGAAGATCTGCATCTT 130208552 >seq3 Length=136109863 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | | || | |||||| ||||||||||| |||||||| || || | Sbjct 25368883 TTCCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAG 25368942 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | ||||||| ||| || || ||| | ||||||||||||||||| | Sbjct 25368943 CAAGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTG 25369002 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || || ||||| ||| ||| ||| || | | | | || || | ||| Sbjct 25369003 GGATACCCTCTTTGTCTTGGATTTTTGCTTTGACATTGTCAATGGTGTCTGAAGACTCGA 25369062 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| || ||||| ||||||| || |||||||| |||||||| Sbjct 25369063 CCTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 25369111 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| | ||||||| ||||| ||||| Sbjct 124971758 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 124971699 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| |||||| || Sbjct 124971698 GCGAAGATGAGACGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 124971639 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| || | ||| |||||||| || |||| ||| Sbjct 124971638 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTT 124971579 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || || ||||| || Sbjct 124971578 TTCACGAAGATCTGCATCTT 124971559 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||| |||||||| ||||| || || |||| ||| | ||||||| ||||| || || Sbjct 125684174 AGTGGATTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGACCGTCCTCGAGCTGCTTTCC 125684233 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || | |||||||||||| ||| | || |||||||| ||||||| ||| Sbjct 125684234 AGCAAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTTGCTTT 125684293 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | ||| || || ||| ||||| ||| || ||||| ||||| | || Sbjct 125684294 GACATTATCGATGGTGTCCGAACTCTCAACTTCCAGGGTGATTGTCTTTCCGGTAAGGGT 125684353 Query 21158 TTTGACAAATATTTGCATT 21176 ||||| || || |||||| Sbjct 125684354 CTTGACGAAAATCTGCATT 125684372 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||| || | || | |||||||||||||| ||||| ||||| | Sbjct 125684371 TTCCACCACGCAGTCGGAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 125684430 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| ||| || | ||||| ||||| || ||||| | || | |||||||||||| || Sbjct 125684431 CCAAGGTGCGGCCATCCTCAAGCTGCTTCCCCGCGAAGATCAACCTCTGCTGGTCCGGGG 125684490 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || ||||| || || || ||||| | | ||| || || || Sbjct 125684491 GGATTCCCTCCTTATCCTGAATTTTGGCCTTCACGTTGTCGATGGTGTCGGAACTTTCAA 125684550 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || || || ||||| ||||| Sbjct 125684551 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAATATCTGCAT 125684599 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | ||||| | || | ||||| ||||| || ||||| || || || Sbjct 125683916 TCCACCACGAAGACGCAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGC 125683975 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 | ||| || ||||||| |||||||| || ||| | || | |||||||||||| ||| Sbjct 125683976 TAAGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGGGG 125684035 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | || ||||| || ||||| |||||| | | | | || || | ||| Sbjct 125684036 AATTCCCTCCTTATCCTGAATCTTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCAAC 125684095 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || || || ||||||||||| ||||| Sbjct 125684096 CTCAAGAGTGATGGTCTTTCCTGTCAAAGTCTTGACAAATATCTGCAT 125684143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||| | ||||| ||| |||||||||||||| ||||| || || || || Sbjct 25369113 CCACCACGGAGCCGCAACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCA 25369172 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | || || ||||| || || || | || || ||||| || || || Sbjct 25369173 AGCGTCCTTCCATCTTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGA 25369232 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| ||||| |||||| | | | | ||||| || ||| Sbjct 25369233 ATGCCCTCTTTGTCCTGAATCTTAGCTTTCACATTGTCAATGGTATCTGAGGATTCCACC 25369292 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || || || |||||||| || ||||| Sbjct 25369293 TCCAGTGTTATGGTCTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 25369339 >seq6 Length=137147148 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || || |||||||| || ||||| | |||| || ||||| || || Sbjct 34075734 GTGGACTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGCTTTCCG 34075793 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||||||||| |||||| ||| Sbjct 34075794 GCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTC 34075853 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| || |||| |||| |||||| ||||| || |||| ||| Sbjct 34075854 ACATTGTCAATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGTTAGGGTT 34075913 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 34075914 TTCACGAAGATCTGCAT 34075930 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | |||||||||||||||||||| || || ||| Sbjct 34075020 CCGCCACGGAGCCTGAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCC 34075079 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || ||| | || || | |||||||||| || Sbjct 34075080 AGAGTGCGTCCGTCCTCAAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGA 34075139 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || ||||| |||||| ||||| | | | ||||||| |||| Sbjct 34075140 ATCCCCTCTTTGTCCTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACC 34075199 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||| ||||||| || || || || || ||||| Sbjct 34075200 TCTAACGTTATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTGCAT 34075246 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||||||||| || || || ||||| | | ||||| |||||||| || Sbjct 34075506 GTGGACTCCTTTTGAATGTTGTAATCGGCGAGGGTGCGACCATCCTCTAGCTGTTTCCCT 34075565 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || |||| |||||| || || | |||||| ||||| ||||| ||| Sbjct 34075566 GCGAAGATGAGTCGCTGCTGATCGGGAGGAATGCCTTCTTTGTCTTGAATCTTGGCCTTC 34075625 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || || |||| || || ||||| ||||||| ||| Sbjct 34075626 ACGTTGTCGATTGTGTCGGAGGATTCAACCTCCAGAGTGATCGTCTTTCCGGTTAGGGTT 34075685 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 34075686 TTGACGAAAATCTGCAT 34075702 >seq9 Length=147089397 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| || ||||| || || ||||| || | ||||| ||||| ||||| Sbjct 145228583 GTGGACTCCTTTTGGATATTATAATCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 145228524 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || |||||||| ||| || | |||||||||||| |||||| || Sbjct 145228523 GCAAAGATGAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 145228464 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||||| | ||| || | || |||||||| ||||| | || Sbjct 145228463 ACGTTGTCGATTGTATCGGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTC 145228404 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 145228403 TTAACAAAGATCTGCAT 145228387 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | ||||| | || | ||||||||||| |||||||||||||| || Sbjct 145229526 TCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGC 145229467 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| | || |||| ||| || || ||| | || | |||||||||||| || Sbjct 145229466 AAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGG 145229407 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | |||||||| || ||||| ||||| | | | | || || | |||| Sbjct 145229406 GATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCCAC 145229347 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| ||||| || || || ||||| || ||||| Sbjct 145229346 CTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCAT 145229299 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || ||||| || ||||| ||||| || || || || ||||||| ||||| ||||| Sbjct 145228355 GTTGATTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCG 145228296 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| ||| | |||||||||||| |||||| || Sbjct 145228295 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTA 145228236 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| ||| | || |||||||| ||||| | || Sbjct 145228235 ACGTTGTCGATGGTGTCTGAGCTCTCGACTTCGAGAGTGATGGTCTTCCCGGTGAGGGTC 145228176 Query 21159 TTGACAAATATTTGCAT 21175 || || || |||||||| Sbjct 145228175 TTAACGAAGATTTGCAT 145228159 >seq5 Length=149900536 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| ||||| || || || || | ||||| ||||| || || Sbjct 20297361 GTGGACTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCCATCCTCGAGCTGCTTACCG 20297420 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | ||||||||||||| ||| | ||| |||||||| ||| || || Sbjct 20297421 GCGAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATTTTGGCCTTG 20297480 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || ||| | |||| || | |||||| ||||| ||||| | || Sbjct 20297481 ACATTATCGATGGTGTCAGAGCTCTCCACCTCAAGGGTAATTGTCTTTCCGGTAAGGGTC 20297540 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 20297541 TTAACAAAGATCTGCAT 20297557 >seq8 Length=129606920 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||| || || | ||| | |||||||||||||||||||| || || ||||| || | Sbjct 126485798 AGCCTCAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGAGTGCGT 126485857 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||| ||||| || || ||| | || || | |||||||||| || | || || Sbjct 126485858 CCGTCCTCAAGCTGGTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCATCT 126485917 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| ||||| | | | ||||||| |||| || | || Sbjct 126485918 TTGTCCTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGCGTT 126485977 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| ||||||| || || || || || | ||| Sbjct 126485978 ATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTACAT 126486015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256379836368