Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4 118 7e-22 seq3 105 4e-18 seq6 102 5e-17 seq5 102 5e-17 seq9 100 2e-16 >seq4 Length=133615181 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 130208323 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 130208382 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||||||||| ||||| ||||| ||||||||||| || Sbjct 130208383 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGG 130208442 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || || Sbjct 130208443 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCACC 130208502 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| || || || || |||||||| |||||||||||| Sbjct 130208503 TCCAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 130208550 >seq3 Length=136109863 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||||| Sbjct 124971788 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 124971729 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||| ||||| ||||||||||| || Sbjct 124971728 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGA 124971669 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || || || Sbjct 124971668 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 124971609 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || || || |||||||| |||||||||||| Sbjct 124971608 TCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 124971561 >seq6 Length=137147148 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | || || ||||| || || ||||||| Sbjct 34075704 CCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTATAGTCGGCA 34075763 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || || |||| || | |||||| || ||||| ||||| |||||||||| || |||| Sbjct 34075764 AGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGG 34075823 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | || | | || | ||||| || || || Sbjct 34075824 -ATGCCTTCCTTGTCTTGGATCTTAGCCTTCACATTGTCAATGGTATCGGAGGACTCCAC 34075882 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || || || || |||||||| ||||||||||| Sbjct 34075883 CTCCAAGGTAATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 34075930 >seq5 Length=149900536 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || || || | || ||||||||| |||||||| |||| Sbjct 23663936 CCGCCGCGGAGGCGGAGGACGAGATGGAGCGTCGATTCTTTCTGGATGTTGTAATCGGCG 23663877 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | |||||| || ||||| ||||| |||||||||| || |||| Sbjct 23663876 AGTGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 23663817 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || ||||| ||||| ||| | | | | || | |||| ||||| || Sbjct 23663816 -ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGATTCCAC 23663758 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || || || |||||||| || |||||||| Sbjct 23663757 CTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 23663710 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||||||||| | | || || ||| |||| || | |||||| || ||||| Sbjct 20297595 TCCTTCTGGATGTTGTAGTCTGCCAAGGTG-CGGCCGTCCTCAAGCTGCTTCCCGGCGAA 20297653 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | || ||||||||| || | | |||||| || || || ||| | | Sbjct 20297654 GATCAACCTCTGCTGGTCCGGTGGAATACCCTCCTTATCCTGGATTTTAGCCTTGACGTT 20297713 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| ||| || || | |||||||| ||||||||||| || || || Sbjct 20297714 GTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAAC 20297773 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 20297774 GAAGATCTGCAT 20297785 >seq9 Length=147089397 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | || ||| |||| || | ||||||||| ||||| Sbjct 145228350 TTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 145228291 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| ||||||||||| ||| | || |||||||| |||||| ||| | | Sbjct 145228290 GATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTAACGTT 145228231 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | ||||| || | |||||||| || |||||||| || || || Sbjct 145228230 GTCGATGGTGTCTGAGCTCTCGACTTCGAGAGTGATGGTCTTCCCGGTGAGGGTCTTAAC 145228171 Query 34378 AAAGATCTGCATC 34390 ||||| |||||| Sbjct 145228170 GAAGATTTGCATC 145228158 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 |||||| || || || | |||||| ||||| | || || ||||| ||||| ||||| Sbjct 145229529 GAATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTC 145229470 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 | || | | || ||||||||||| ||||| || || | || ||||||||| Sbjct 145229469 AGCAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGG 145229410 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 || | | ||||| || ||||| ||| | || | | || | |||| || Sbjct 145229409 TGGGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTC 145229350 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || |||| |||||||| || ||||| | ||| |||||||| ||||||||| ||| Sbjct 145229349 CACCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCATCCCTC 145229294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069842282880