Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 seq9 84.2 2e-11 seq8 82.4 6e-11 >seq3 Length=136109863 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||| ||||| ||||| || ||||||||||| ||||| | ||| ||| ||| Sbjct 25369583 AAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCTACCATC 25369642 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||| | |||||| || || | ||||| ||||| || || || | ||||| ||||| Sbjct 25369643 TTCAAGTTGTTTTCCGGCGAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCTTTATC 25369702 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| |||||| | ||| || || || |||| ||||||| | Sbjct 25369703 CTGAATTTTGGCCTTGACATTATCAATTGTATCGGAACTTTCCACCTCAAGGGTGATGGT 25369762 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| ||||| ||||| || || |||||||| Sbjct 25369763 CTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 25369795 >seq9 Length=147089397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||| || || || || || ||||| ||||||| || | ||| || Sbjct 145228823 ACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCATCCTCG 145228764 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | || ||||| || ||||||| ||||| || ||| || | |||||||||||| Sbjct 145228763 AGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 145228704 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| | ||| |||| ||||||| |||| Sbjct 145228703 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTTTTC 145228644 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| | || |||||||| || ||||| Sbjct 145228643 CCGGTAAGGGTCTTTACAAAGATCTGCAT 145228615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18097 ATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGG 18156 |||| || || || | || || | |||||| || || || || |||||||| ||||| | Sbjct 145229527 ATCCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCAG 145229468 Query 18157 CCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGG 18216 | | || | | ||||||||| || || || ||| |||| | || || || ||| | Sbjct 145229467 CAAGGGTCCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTG 145229408 Query 18217 GCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | | ||||||||||| ||| | ||| || | ||| ||||| | ||| Sbjct 145229407 GGATACCTTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCCA 145229348 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | || |||||||| || || |||||||| ||||| Sbjct 145229347 CCTCCAAGGTGATGGTCTTACCGGTCAAAGTCTTCACAAAAATCTGCAT 145229299 >seq8 Length=129606920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || | |||| ||||||||| || || ||||| |||||||||||||| Sbjct 83941502 TCCTCCCCTGAGCCTCAAAACCAAGTGAAGTGTCGACTCCTTTTGTATGTTGTAGTCGGC 83941561 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||||| || ||||||||| |||| || || || || || || Sbjct 83941562 AAGAGTGCGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGTGG 83941621 Query 18218 CACGCCTTCCTTATC 18232 | || |||||||| Sbjct 83941622 GATACCCTCCTTATC 83941636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341466456260