Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 172 5e-38 seq5 98.7 9e-16 seq3 98.7 9e-16 seq8 95.1 1e-14 seq4 93.3 4e-14 seq9 89.7 5e-13 >seq6 Length=137147148 Score = 172 bits (190), Expect = 5e-38 Identities = 407/606 (67%), Gaps = 13/606 (2%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| |||||| || || |||| || || || ||| | |||||||| || || || Sbjct 120288154 AGATTCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAG 120288095 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 |||||||| ||||| | || ||||| ||||| || || || || | ||||| || Sbjct 120288094 GCATCGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACCTCCGCCACTGGGAATCT 120288035 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 |||| || ||| | | ||||| | ||||| | || || ||||||||||||||| Sbjct 120288034 CTCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGAT 120287975 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || || || |||||| | | || ||| || | || || || || | ||||| Sbjct 120287974 GGCATCGTCCTGGAGAATCTCGCCGGAAGGTTCATGAAGGAGGTTCAGGTCTCCGAGGCA 120287915 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||| ||||| || || | || || || ||| | || ||||| ||||| || Sbjct 120287914 CGCGCCTTCTACGGCTTCCAGATCGCAATCGAGAACATCCACTCAGAGATGTACAGCCTC 120287855 Query 57837 CTCATCGATACGTACGTGAAGGA--CAAC-GACGAGAAACGTAGACTGTTCAACGCGATC 57893 || |||| || ||| | || || || | || |||| ||| || ||| |||| || Sbjct 120287854 CTTCTCGAAACTTACATCAAAGACTCATCAGAGAAGAATCGT---CTCTTCCACGCAATT 120287798 Query 57894 GAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC 57952 || || | || ||| | ||||| || |||||| | | |||||| | | Sbjct 120287797 GAGACCGTTCCTTGCG-TAAAGAAGAAAGCCGAGTGGGCCCTACGATGGATCGA---TGG 120287742 Query 57953 CACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 | | | ||||||| || | | ||||||||||| |||||||| || ||||| || Sbjct 120287741 CTCAGAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGTGTCGAAGGGATCTTCTTCTC 120287682 Query 58013 GGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 || ||||| ||| | ||||||||| |||| || ||||| | ||||| || | || | Sbjct 120287681 CGGGAGCTTCTGC-TCGATATTTTGGCTGAAAAAGCGCGGGTTAATGCCAGGTTTAACCT 120287623 Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT 58131 | ||||||||||| ||||| || || || || || ||||| |||||| | ||| Sbjct 120287622 TCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCGCGTGCTTGCTGT 120287563 Query 58132 ACTCTC 58137 |||||| Sbjct 120287562 ACTCTC 120287557 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || ||||| || | || || || || Sbjct 34075246 ATGCAGATTTTCGTGAAGACTCTAACCGGGAAGACGATAACGTTAGAGGTGGAGAGTTCT 34075187 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || || || ||| || |||||| || || | || || ||||| Sbjct 34075186 GATACTATTGATAACGTGAAGGCAAAGA-TACAGGACAAAGAGGGGATTCCACCGGACCA 34075128 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||||||| || ||||| || ||| | || ||| ||| || |||||| || Sbjct 34075127 GCAGCGTCTAATCTTTGCTGGGAAGCAGCTTGAGGACGGACGCACTCTGGCCGATTACAA 34075068 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||| || || || || ||||| || || || || | |||||| Sbjct 34075067 CATTCAAAAGGAGTCCACCCTCCATCTTGTTCTCAGGCTCCGTGGCGGT 34075019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| || || || || || || |||||||| | || |||||| | || Sbjct 34075703 CATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTC 34075644 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||| |||||| | || ||||| || Sbjct 34075643 CGACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCA 34075584 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| || |||||| | || || | || | |||||| || Sbjct 34075583 GCAGCGACTCATCTTCGCAGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAA 34075524 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||||| || || || || || || || || Sbjct 34075523 CATTCAAAAGGAGTCCACGCTCCACCTTGTTCT 34075491 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||| | | |||||| || ||||| || || || ||||| || ||||| ||| | || || Sbjct 34075939 GAAACTATCATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATTACCTTGGAGGTG 34075880 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || | ||||| | | || | || || | || |||||||||||| | ||| Sbjct 34075879 GAGTCCTCCGATACCATTGACAATGTGAAGGCTAAGATCCAAGACAAGGAAGGCATCCCG 34075820 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || |||||||||||||| || ||||| || || ||| | |||||| | || | | Sbjct 34075819 CCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACCCTTGCC 34075760 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || || || || || || || || || Sbjct 34075759 GACTATAATATCCAGAAGGAGTCCACGCTCCACCTCGTCCT 34075719 >seq5 Length=149900536 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||| |||| ||||| |||||||| || || || || || || || |||||| | || || Sbjct 23663702 GAAGCAAA-ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTG 23663760 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 ||| | ||||||| |||| | || || | || ||||| ||||| | ||| Sbjct 23663761 GAATCTTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCG 23663820 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||||||||| || || ||||| || || ||| | || ||| || | | Sbjct 23663821 CCGGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACACTCGCC 23663880 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || ||||||||||| || ||||| || || Sbjct 23663881 GATTACAACATCCAGAAAGAATCGACGCTCCATCTCGTCCT 23663921 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || |||||| |||| || || || || ||| | || || || || Sbjct 20297102 CATGCAGATTTTTGTTAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTGGAGAGCTC 20297043 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | |||||| | || ||||||||| || | || || ||||| Sbjct 20297042 CGACACCATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGGATCCCCCCGGACCA 20296983 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || ||||| || || ||||||||||| | ||| | ||||| || Sbjct 20296982 GCAGAGGTTGATCTTCGCAGGGAAGCAGTTGGAAGATGGAAGGACCCTTGCTGATTACAA 20296923 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || |||||||| || || ||| Sbjct 20296922 TATTCAGAAGGAGTCTACTCTTCACCTTGTGCTT 20296889 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || |||||| |||| || || Sbjct 124971557 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGT 124971616 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||||||| | || || | Sbjct 124971617 CTTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCGG 124971676 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||||||||| || ||||| ||||| ||| | || ||| | || | ||| | Sbjct 124971677 ACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACT 124971736 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || || || || || || || Sbjct 124971737 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCT 124971773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| ||||| || ||||| || || | || || ||| ||| Sbjct 25368655 ATGCAAATTTTTGTGAAGACCCTGACGGGGAAAACCATTACTTTGGAGGTCGAAAGCTCC 25368596 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || || || ||||||||| || | || || || ||| Sbjct 25368595 GATACCATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCAG 25368536 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||||||||| ||||| || | || || || ||||| Sbjct 25368535 CAGAGGCTCATCTTTGCTGGCAAACAATTGGAGGATGGTCGTACATTGGCAGACTATAAT 25368476 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| |||||||| || ||||| || ||| Sbjct 25368475 ATCCAAAAGGAATCGACCCTCCATCTTGTCCTT 25368443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| |||| || ||||| |||||| | || || ||| | || Sbjct 25369568 CATGCAAATTTTCGTGAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTCGAATCCTC 25369509 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| | ||| ||||| || || | || || ||||| Sbjct 25369508 AGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCACCTGACCA 25369449 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370 |||| | | || || ||||| || ||| | || || | ||| | ||| ||||| | Sbjct 25369448 GCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGAC-ACTAGCAGATTACA 25369390 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||||| || || || || ||||| |||| || Sbjct 25369389 ACATTCAGAAGGAGTCAACGCTTCACTTGGTTCT 25369356 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || || || |||| || || || Sbjct 125684827 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACCATTACTCTCGAGGTCGAGAGTTCT 125684768 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || ||| || |||||||| | || ||||||||| Sbjct 125684767 GACACCATCGATAATGTGAAGGCGAAAATTCAAGATAAGGAAGGGATCCCTCCCGACCAG 125684708 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| ||||| || |||||| |||| || Sbjct 125684707 CAGCGTCTAATCTTCGCCGGAAAACAGCTGGAGGA 125684673 >seq8 Length=129606920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||| | |||||||| |||||||| || || || ||||| || | || || || || Sbjct 126486015 ATGTAGATTTTCGTGAAGACTCTAACCGGGAAGACGATAACGCTAGAGGTGGAGAGTTCT 126485956 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || || || ||| || |||||| || || | || || ||||| Sbjct 126485955 GATACTATTGATAACGTGAAGGCAAAGA-TACAGGACAAAGATGGGATTCCACCGGACCA 126485897 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||||||| || ||||| || ||| | || ||| ||| || ||||| || Sbjct 126485896 GCAGCGTCTAATCTTTGCTGGGAACCAGCTTGAGGACGGACGCACTCTGGCTGATTACAA 126485837 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||| || || || || ||||| || || || || | |||||| Sbjct 126485836 CATTCAAAAGGAGTCCACCCTCCATCTTGTTCTGAGGCTCTGTGGCGGT 126485788 >seq4 Length=133615181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || |||||| | || || || Sbjct 130208554 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGT 130208495 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | || || | || ||||||||||||| | || || | Sbjct 130208494 CTTCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGG 130208435 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||||||| || ||||| ||||| ||| |||| ||| Sbjct 130208434 ACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGAC 130208394 >seq9 Length=147089397 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || || ||||| |||| || || || Sbjct 145228159 ATGCAAATCTTCGTTAAGACCCTCACCGGGAAGACCATCACTCTCGAAGTCGAGAGCTCA 145228218 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 145228219 GACACCATCGACAACGTTAAGGCAAAGATTCAAG-ACAAGGAAGGCATCCCCCCGGACCA 145228277 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| || | || || || Sbjct 145228278 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACACTCGCTGACTACAA 145228337 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||| || || || Sbjct 145228338 CATCCAGAAGGAATCAACCCTTCACCTTGTCCT 145228370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763346500160