Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq6 147 3e-30 seq3 107 3e-18 seq9 91.5 2e-13 >seq6 Length=137147148 Score = 147 bits (162), Expect = 3e-30 Identities = 410/618 (66%), Gaps = 12/618 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| ||| || |||||||||||||| || || || |||| || | ||||| || | Sbjct 120287563 ACAGCAAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGA 120287622 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | || | || ||||||| || |||||||| ||||||||||| || ||| || ||| Sbjct 120287623 AGGTTAAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCGA-GCAGAAGCTCCCG 120287681 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT- 50129 || |||||||| ||||| || ||| || || || | | || | ||| | || Sbjct 120287682 GAGAAGAAGATCCCTTCGACACAGGCGAACGCGACGATGCGTTC-CGCGAAC-GATTCTG 120287739 Query 50130 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 50188 | ||| ||||| | | ||||| ||||| ||||| ||||| ||||| | || || | Sbjct 120287740 AGCCATCGATCCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAA 120287799 Query 50189 TGGCATTAAAGAGATAGtttttttCATTACTA-TCTTTAACATAAGTATCGATCAAAAGA 50247 | || | |||||| || || || | | | ||||| | ||||| |||| | || Sbjct 120287800 TTGCGTGGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGG 120287858 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || ||||| || || || ||||| || || || ||||| || |||||||| | ||| Sbjct 120287859 CTGTACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCC 120287918 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367 |||| | ||| || || | || | | | || | ||| || || || || || Sbjct 120287919 TCGGAGACCTGAACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCG 120287978 Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCG--TTGGGTGTTAGTT 50425 || || || || || | || || | ||||| || ||| | |||| || | Sbjct 120287979 GATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGAT 120288038 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||| | || || || | || ||||| ||| ||||||| || ||||||| Sbjct 120288039 --TCCCAGTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCT 120288096 Query 50486 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTAT 50545 | || || || ||||| | ||| || ||| | |||||||||||||| || ||||| | Sbjct 120288097 CCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATGCAGAATCTGT 120288156 Query 50546 TTGGATTTGGTGCAAGGA 50563 || ||||| ||||||| Sbjct 120288157 CAGGGTTTGGAGCAAGGA 120288174 Score = 86.0 bits (94), Expect = 9e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207 ||||||||||||||| ||||| || || ||| ||||| ||| |||||| ||||| Sbjct 67164552 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTA 67164493 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 || || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 67164492 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 67164433 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCAT 80297 ||| || |||||||| |||||||| |||| Sbjct 67164432 ATATATTCCCTCTATACTATCATCTTTCAT 67164403 >seq3 Length=136109863 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 ||| || ||||| | || | ||| || | ||| | || | | ||| |||| |||||| Sbjct 115211374 TCCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACACGTAGCATAGGAACAATACC 115211315 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 ||||||||| ||||| || || ||| ||||| ||| |||||||||| || || || Sbjct 115211314 ATTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCACGAATGTTGTGAACAGA 115211255 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | ||| ||||||||||| ||| ||| | || || || || |||||||| || Sbjct 115211254 AACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCTTCAAAGTATCATATAT 115211195 Query 80274 GCCCTCTATGCTATCATCAATCAT 80297 |||||||| |||||||| |||| Sbjct 115211194 TCCCTCTATACTATCATCTTTCAT 115211171 Score = 89.7 bits (98), Expect = 7e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 ||||| ||||| || | || || ||||| || || |||||| ||| ||||| | | | Sbjct 115211007 GTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGAGACATCATGTGG 115210948 Query 80395 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTAA 80453 || || | ||| |||||||| || | ||| |||||||| || || || | ||| || Sbjct 115210947 TAAGTTCTGACAGCGGATTCTATGTCATCCTTG-TGAATTCCAACAGCAACCCTCATCAA 115210889 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 ||||||||| || ||||| || | ||| | | ||||| | ||| || | |||| Sbjct 115210888 CATGTGCTGGGGCCTTTCCACAACCTTTCCTTGAACCTTCAAGAGGTAGGACCTCTCCAG 115210829 Query 80514 AGTTTTAAAACCAAAATA 80531 ||||| |||||||| || Sbjct 115210828 GGTTTTGAAACCAAAGTA 115210811 >seq9 Length=147089397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACT 80207 ||||||||||||||| ||||| || || ||| ||||| ||| |||||| ||||| Sbjct 92823064 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTG 92823123 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 ||| || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 92823124 AATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 92823183 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCAT 80297 ||| || |||||||| |||||||| |||| Sbjct 92823184 ATATATTCCCTCTATACTATCATCTTTCAT 92823213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263879858720