Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6 131 2e-25 seq3 111 2e-19 seq9 95.1 2e-14 seq10 84.2 3e-11 seq2 84.2 3e-11 >seq6 Length=137147148 Score = 131 bits (144), Expect = 2e-25 Identities = 405/617 (66%), Gaps = 10/617 (2%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || |||||||||||||| || || ||||||| || || ||||| || | Sbjct 120287563 ACAGCAAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGA 120287622 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCA 42175 | || | || ||||||| || |||||||| ||||||||||| || ||| | | | || Sbjct 120287623 AGGTTAAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCGA-GCAGAAGCTCCCG 120287681 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT- 42234 || |||||||| ||||| || || || || | | | ||| | || || Sbjct 120287682 GAGAAGAAGATCCCTTCGACACAGGCGAACGC--GACGATGCGTTCCGCGAACGATTCTG 120287739 Query 42235 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 | ||| ||||| | | ||||| ||||| ||||| ||||| ||||| | || || | Sbjct 120287740 AGCCATCGATCCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAA 120287799 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTA-TCTTTAACATATGTATCGATCAAAAGA 42352 | || | |||||| || || || | | | ||||| | || || |||| | || Sbjct 120287800 TTGCGTGGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGG 120287858 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 || ||||| ||||| || ||||| || || || ||||| || |||||||| | ||| Sbjct 120287859 CTGTACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCC 120287918 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 |||| ||||| || || | || | | | || | ||| || || || || || Sbjct 120287919 TCGGAGACCTGAACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCG 120287978 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTA 42532 || || || || || | || || | ||||| | ||| ||| | | | | Sbjct 120287979 GATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCG-CCGTCGGTGAGAGA 120288037 Query 42533 TT-CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 || ||| | || || || | || ||||| || | ||||| || ||||| || Sbjct 120288038 TTCCCAGTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTC 120288097 Query 42592 TGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATT 42651 || || || ||||| | ||| || ||| | ||||| |||||||| || ||||| | Sbjct 120288098 CGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATGCAGAATCTGTC 120288157 Query 42652 TGGATTTGGTGCAAGGA 42668 || ||||| ||||||| Sbjct 120288158 AGGGTTTGGAGCAAGGA 120288174 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 |||||||||||||| ||||| || || ||| ||||| ||| |||||| |||||| Sbjct 67164552 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTA 67164493 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 || || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 67164492 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 67164433 Query 72351 ATAGATGCCCTCTATACTATCATCCATCAT 72380 ||| || ||||||||||||||||| |||| Sbjct 67164432 ATATATTCCCTCTATACTATCATCTTTCAT 67164403 >seq3 Length=136109863 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| || ||||| | || | ||| || | ||| | || | | ||| |||| |||||| Sbjct 115211374 TCCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACACGTAGCATAGGAACAATACC 115211315 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||||||| ||||| || || ||| ||||| ||| |||||||||| ||| || || Sbjct 115211314 ATTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCACGAATGTTGTGAACAGA 115211255 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||||||||| ||| ||| | || || || || |||||||| || Sbjct 115211254 AACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCTTCAAAGTATCATATAT 115211195 Query 72357 GCCCTCTATACTATCATCCATCAT 72380 ||||||||||||||||| |||| Sbjct 115211194 TCCCTCTATACTATCATCTTTCAT 115211171 >seq9 Length=147089397 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 |||||||||||||| ||||| || || ||| ||||| ||| |||||| |||||| Sbjct 92823064 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTG 92823123 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 ||| || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 92823124 AATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 92823183 Query 72351 ATAGATGCCCTCTATACTATCATCCATCAT 72380 ||| || ||||||||||||||||| |||| Sbjct 92823184 ATATATTCCCTCTATACTATCATCTTTCAT 92823213 >seq10 Length=136175642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC 72289 ||||||||||||||| ||||| || || || ||||| ||| |||||| |||||| Sbjct 96114342 TAATACCATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGT 96114283 Query 72290 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 72349 || | | ||| ||||||||||| ||| || | || || || || |||| Sbjct 96114282 GAACAAAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 96114223 Query 72350 CATAGATGCCCTCTATACTATCATCCATCAT 72380 |||| || ||||||||||||||||| |||| Sbjct 96114222 CATATATTCCCTCTATACTATCATCTTTCAT 96114192 >seq2 Length=108997779 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 |||||||||||||| ||||| || || || ||||| ||| |||||| |||||| Sbjct 95796887 AATACCATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGTA 95796828 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 || || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 95796827 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 95796768 Query 72351 ATAGATGCCCTCTATACTATCATC 72374 ||| || ||||||||||||||||| Sbjct 95796767 ATATATTCCCTCTATACTATCATC 95796744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134602696480