Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 seq6 102 7e-17 seq8 95.1 1e-14 seq9 93.3 4e-14 seq5 89.7 4e-13 seq3 84.2 2e-11 >seq4 Length=133615181 Score = 105 bits (116), Expect = 6e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || || | || |||||||||||||| Sbjct 130208347 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGC 130208406 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | ||||||||| ||| || | | |||||||||| ||| || Sbjct 130208407 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTG 130208466 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||| | | | || ||||| |||| ||||||| ||| | || ||||| || || | Sbjct 130208467 GCCTTCACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCG 130208524 Query 48702 TGAGAGTTTTCACAAAAATCTGCATC 48727 | || |||||||| || ||||||||| Sbjct 130208525 TTAGGGTTTTCACGAAGATCTGCATC 130208550 >seq6 Length=137147148 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || | ||| || ||| ||||||||||||||||||||| || Sbjct 34075019 ACCGCCACGGAGCCTGAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGC 34075078 Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || | || || ||||||| |||||||| || | | |||| ||||||||| ||| | Sbjct 34075079 CAGAGTG-CGTCCGTCCTCAAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTG 34075137 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | | || |||||| || || ||| | | || ||||| | | |||| Sbjct 34075138 GAATCCCCTCTTTGTCCTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCA 34075197 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | ||||| || || ||||| ||||| ||||| |||||||||||| Sbjct 34075198 CCTCTAACGTTATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTGCATC 34075247 >seq8 Length=129606920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCT 48581 ||| || ||| |||||||||||||||||||||||||| | || || ||||||| |||| Sbjct 126485812 ATGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGAGTG-CGTCCGTCCTCAAGCT 126485870 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 | || || | | |||| ||||||||| ||| || | | || |||||| || | Sbjct 126485871 GGTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCATCTTTGTCCTGTATCT 126485930 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||| | | || ||||| | | |||| ||| | ||||| || || |||| Sbjct 126485931 TTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGCGTTATCGTCTTCCCGG 126485990 Query 48702 TGAGAGTTTTCACAAAAATCTGCATC 48727 | ||||| ||||| ||||||| |||| Sbjct 126485991 TTAGAGTCTTCACGAAAATCTACATC 126486016 >seq9 Length=147089397 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCTG 48582 ||||| ||| |||||| |||||||| || ||||| || ||| || || |||| ||| Sbjct 145229501 TGAAGGGTGGACTCCTTCTGAATGTTATAGTCAGC-AAGGGTCCTTCCATCTTCCAACTG 145229443 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | | || || | |||||| ||| || | || |||||| ||| ||| || Sbjct 145229442 CTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCCTGAATCTT 145229383 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | ||||| |||| |||| ||| | || ||||| |||||||| Sbjct 145229382 AGCCTTCACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTACCGGT 145229323 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 | ||| |||||||||||||||||| Sbjct 145229322 CAAAGTCTTCACAAAAATCTGCATC 145229298 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCTG 48582 ||||| ||| |||||| |||||||||||||||| ||| ||| | | ||||| ||||| Sbjct 145229273 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAG-CAAGGGTCCTTCCATCCTCAAGCTG 145229215 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | |||| || | ||||| ||| || | | ||||| || ||| || Sbjct 145229214 CTTACCAGCAAAAATCAACCTTTGCTGGTCCGGTGGAATGCCCTCCTTATCTTGAATCTT 145229155 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || |||| |||| ||| | || || || || ||||| Sbjct 145229154 GGCCTTCACATTGTCAATTGTGTCGGAGCTCTCCACCTCAAGAGTGATTGTCTTTCCGGT 145229095 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || |||||||||||||| Sbjct 145229094 GAGGGTCTTAACAAAAATCTGCAT 145229071 >seq5 Length=149900536 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| ||| |||||| || || ||||| || ||||| ||| | || || ||||| Sbjct 20297126 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCCAAGGTGCGCCCATCTTCAAGCTG 20297185 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || || | |||||| ||| || | || ||||||||| || || Sbjct 20297186 CTTACCAGCAAAGATCAACCTCTGCTGGTCCGGGGGGATACCTTCCTTGTCTTGGATCTT 20297245 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||| | | ||||| || | |||| ||| | || |||||||| ||||| Sbjct 20297246 AGCTTTGACATTATCAATGGTGTCAGAGCTCTCCACCTCAAGAGTGATGGTTTTCCCGGT 20297305 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || ||||| ||||||||||| Sbjct 20297306 GAGGGTCTTCACGAAAATCTGCAT 20297329 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 || || || ||||||||||| || | | || ||||||| |||||||| ||| || | Sbjct 23663900 TCTTTCTGGATGTTGTAATCGGCGAGTGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 23663841 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653 || | |||||||| ||| ||| | | ||| ||||| || || ||| | | | Sbjct 23663840 ATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTG 23663781 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 || ||||| |||| ||| ||| ||| | || ||||| || || || || ||||||| Sbjct 23663780 TCG--ATGGTGTCGGAAGATTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 23663723 Query 48714 CAAAAATCTGCAT 48726 | ||||||||||| Sbjct 23663722 CGAAAATCTGCAT 23663710 >seq3 Length=136109863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TC 48573 ||||| ||||| | ||| |||||| ||||| |||||||| || || ||| || || Sbjct 25369128 AACACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGC-AAGCGTCCTTCCATC 25369186 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||||||| || | || | | ||| ||||| || | | || ||||| Sbjct 25369187 TTCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATGCCCTCTTTGTC 25369246 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || || | | | |||||||| | || ||| ||| | ||||||||| Sbjct 25369247 CTGAATCTTAGCTTTCACATTGTCAATGGTATCTGAGGATTCCACCTCCAGTGTTATGGT 25369306 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || | ||| || |||||||||||||| Sbjct 25369307 CTTCCCTGTCAAAGTCTTGACAAAAATCTGCAT 25369339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| || |||||| || |||||||| || || || || || | ||||||||||| Sbjct 125684625 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGC-AAGGGTACGGCCATCCTCCAGCTG 125684683 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 || ||| || | |||| ||||||||| || || | | |||||| || |||||| Sbjct 125684684 TTTTCCGGCGAAGATTAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTATCTTGAATTTT 125684743 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | ||| | | | ||||| || | | ||| ||||| || ||||| || ||||| Sbjct 125684744 CGCCTTCACATTATCGATGGTGTCAGAACTCTCGACCTCGAGAGTAATGGTCTTTCCGGT 125684803 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 ||| || || || || || |||||| Sbjct 125684804 GAGGGTCTTGACGAAGATTTGCATC 125684828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248386568548