Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-31 seq7 120 5e-23 seq4 109 9e-20 seq2 109 9e-20 >seq1 Length=137414913 Score = 149 bits (164), Expect = 1e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || || | ||| | ||||||||||| || ||||||||||| || || Sbjct 136145822 GCTAAGCGCCACCGTAAGGTTCTGAGGGATAACATCCAGGGTATCACCAAGCCCGCCATT 136145763 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | |||||||| ||||||||| || || | |||| || |||| Sbjct 136145762 CGCCGTCTTGCAAGGCGTGGTGGTGTCAAGCGTATCAGCGGTCTCATCTACGAGGAGACA 136145703 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | ||||||||||| ||| ||| || | ||||| || || |||||| Sbjct 136145702 CGTGGCGTTCTCAAGATCTTCCTTGAGAACGTCATTCGCGATGCCGTCACTTACACCGAG 136145643 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| |||||||| || || |||||||| ||||||| ||| | || | || ||| Sbjct 136145642 CACGCTCGCCGTAAGACAGTTACTGCCATGGATGTCGTCTACGCACTCAAGAGGCAGGGC 136145583 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| |||||| | ||| Sbjct 136145582 AGGACCCTCTATGGATTTGGAGGCTAA 136145556 Score = 147 bits (162), Expect = 3e-31 Identities = 201/280 (72%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||||||||| || | || | ||||||||||| || |||||||| || || || Sbjct 136147716 GCTAAGCGTCACCGTAAGGTACTGAGGGATAACATCCAGGGTATCACCAAACCCGCCATT 136147657 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | ||||| || ||||||||| || || | | || || |||| Sbjct 136147656 CGCCGTCTCGCAAGGCGTGGCGGTGTCAAGCGTATCAGCGGTCTCATTTACGAGGAGACA 136147597 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||| | ||||||||||| ||| ||| || | || || | ||| || ||| Sbjct 136147596 CGTGGTGTTCTCAAGATCTTCCTTGAGAACGTCATTCGCGACGCCGTGACCTACACTGAG 136147537 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||| || ||||| || || |||||||| ||||||||||| | || | |||||| Sbjct 136147536 CACGCTCGCCGCAAGACAGTTACTGCCATGGATGTCGTCTATGCACTCAAGAGGCAAGGC 136147477 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAA 16712 | | | |||||||||||| | ||| |||| |||||| Sbjct 136147476 AGGACTCTCTATGGTTTTGGAGGCTAAGCTTC--ATCAAA 136147439 Score = 129 bits (142), Expect = 9e-26 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| ||| ||||||||||||| || ||||| ||||| || || Sbjct 136133514 GCAAAGCGCCACCGCAAGGTTCTGAGAGATAACATCCAGGGTATCACGAAGCCCGCCATT 136133455 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | |||||||| ||||||||| | || | |||| || |||| Sbjct 136133454 CGCCGTCTCGCAAGGCGTGGTGGTGTCAAGCGTATTAGCGGCCTCATCTACGAGGAGACA 136133395 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || | ||||||||||| ||| ||| || | |||||| | ||| || ||| Sbjct 136133394 CGTGGCGTCCTCAAGATCTTCCTTGAGAACGTCATTCGTGATGCCGTTACCTACACTGAG 136133335 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 || ||| || |||||||||||| |||||||| | ||||| || Sbjct 136133334 CATGCTCGCCGCAAGACTGTCACCGCCATGGATGTTGTCTACGC 136133291 >seq7 Length=126351151 Score = 120 bits (132), Expect = 5e-23 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || |||||||| || |||||||| ||||| || || || | ||||| | | || Sbjct 28710747 TCTCCGCGATAACATTCAGGGAATCACGAAGCCTGCGATTCGGAGGCTGGCAAGAAGAGG 28710688 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || || || || ||| ||| |||||||||||| ||||| |||| | |||||||| Sbjct 28710687 TGGCGTGAAACGAATCAGTGGTTTGATCTATGAAGAGACTCGTGGTGTTCTTAAGATCTT 28710628 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 || ||| ||| || | |||||| | || || |||||||| | | ||||| || Sbjct 28710627 TCTGGAGAACGTGATTCGTGATGCGGTGACATACACGGAGCACGCAAGGAGGAAGACCGT 28710568 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || |||||||| | || ||||| |||| | || || | | | ||||| ||||| Sbjct 28710567 GACGGCCATGGATGTTGTTTATGCTCTGAAGAGGCAGGGAAGGACCCTCTATGGGTTTGG 28710508 Query 16693 A 16693 | Sbjct 28710507 A 28710507 >seq4 Length=133615181 Score = 109 bits (120), Expect = 9e-20 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| ||||||||||| || || || || || ||| ||||||| | || Sbjct 3928267 CTTCGTGATAACATTCAAGGAATCACGAAACCCGCCATTCGCCGTTTGGCTCGCAGGGGA 3928326 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || || | ||||||| |||| |||| || | ||||||||| Sbjct 3928327 GGCGTCAAGAGAATCAGCGGTCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 3928386 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| | ||| |||||||||||| || || || || Sbjct 3928387 TTGGAGAACGTCATTCGCGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 3928446 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| |||| ||||| Sbjct 3928447 ACTGCCATGGATGTCGTTTATGC 3928469 >seq2 Length=108997779 Score = 109 bits (120), Expect = 9e-20 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || |||||||| || ||||| || || ||| ||||||| | || Sbjct 24828663 CTTCGTGATAACATTCAGGGAATCACGAAACCAGCCATTCGCCGTTTGGCTCGCAGGGGA 24828604 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || ||| | ||||||| |||| |||| || | ||||||||| Sbjct 24828603 GGCGTCAAGAGAATCAGTGGCCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 24828544 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| | ||| |||||||||||| || || || || Sbjct 24828543 TTGGAGAACGTCATTCGCGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 24828484 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| | || ||||| Sbjct 24828483 ACTGCCATGGATGTTGTTTATGC 24828461 Score = 109 bits (120), Expect = 9e-20 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || |||||||| || || || || || ||| ||||||| | || Sbjct 27421207 CTTCGTGATAACATTCAGGGAATCACGAAACCCGCCATTCGCCGTTTGGCTCGCAGGGGA 27421148 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || ||| | ||||||| |||| |||| || | ||||||||| Sbjct 27421147 GGCGTCAAGAGAATCAGTGGCCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 27421088 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | |||||| | ||| |||||||||||| || || || || Sbjct 27421087 TTGGAGAACGTCATTCGCGATGCTGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 27421028 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| | || ||||| Sbjct 27421027 ACTGCCATGGATGTAGTTTATGC 27421005 Score = 105 bits (116), Expect = 1e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| || |||||||| || || || || || ||| ||||||| | || Sbjct 25033527 CTTCGTGATAACATTCAGGGAATCACGAAACCCGCCATTCGCCGTTTGGCTCGCAGGGGA 25033468 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||| | || ||| | ||||||| |||| |||| || | ||||||||| Sbjct 25033467 GGCGTCAAGAGAATCAGTGGCCTCATCTATGAGGAGACACGTGGCGTCCTCAAGATCTTC 25033408 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| ||| || | ||||| | ||| |||||||||||| || || || || Sbjct 25033407 TTGGAGAACGTCATTCGCGATGCCGTTACCTACACCGAGCACGCTCGCCGCAAAACCGTT 25033348 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || |||||||| | || ||||| Sbjct 25033347 ACTGCCATGGATGTTGTTTATGC 25033325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074698959764