Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq3 91.5 1e-13 seq5 89.7 5e-13 seq4 82.4 7e-11 >seq6 Length=137147148 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| ||||| ||||||| | || | ||||| | Sbjct 34075702 ATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTCC 34075643 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| ||||||||||| || ||||||||||| Sbjct 34075642 GACACAATCGACAACGTGAAGGCCAAGATTCAAGACAAAGAAGGCATTCCTCCCGATCAG 34075583 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||||| | || || ||||| || || |||| | | | | || ||| || ||| Sbjct 34075582 CAGCGACTCATCTTCGCAGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAAC 34075523 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| || || || |||| || || || Sbjct 34075522 ATTCAAAAGGAGTCCACGCTCCACCTTGTTCT 34075491 >seq3 Length=136109863 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || | |||||| |||| | || || Sbjct 124971559 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTCGAGGTGGAGTCT 124971618 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 124971619 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCGGAC 124971678 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | || |||||| || ||||| || | | | | | || |||||| Sbjct 124971679 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCGCCGACTAC 124971738 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| || ||||| Sbjct 124971739 AACATCCAGAAGGAGTCCACCCTCCACCTTGTCCT 124971773 >seq5 Length=149900536 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 || ||||||||| | || || ||||| |||| || || | |||||| | || | || Sbjct 23663703 AAGCAAAATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGA 23663762 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| |||||||||||| | || || ||||| ||||||||||| || || || Sbjct 23663763 ATCTTCCGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCGCC 23663822 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 || || || | ||||| | || ||| || || || || || | | | || ||| Sbjct 23663823 GGACCAGCAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACACTCGCCGA 23663882 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || |||||||| || ||||||| ||||| Sbjct 23663883 TTACAACATCCAGAAAGAATCGACGCTCCATCTCGTCCT 23663921 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | ||||| |||| | || | Sbjct 20298013 ATGCAAATCTTTGTGAAGACCCTCACTGGAAAGACTATCACTCTCGAGGTCGAGAGTTCC 20297954 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||| ||| || || |||||||| || || ||||| Sbjct 20297953 GACACCATCGATAACGTCAAGGCAAAAATTCAAGATAAGGAAGGGATCCCACCGGATCAG 20297894 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || ||| || |||||||| || | | | | | |||||| ||| Sbjct 20297893 CAACGTCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAAC 20297834 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| || |||| || || || Sbjct 20297833 ATCCAGAAGGAATCCACCCTCCACCTCGTTCT 20297802 >seq4 Length=133615181 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || | |||||| | || | || || Sbjct 130208552 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTGGAGGTGGAGTCT 130208493 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | || || |||||| ||||| ||||| || ||||| || Sbjct 130208492 TCCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGAC 130208433 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | || |||||| || || || || | | | | || |||||| Sbjct 130208432 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTAC 130208373 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || || |||| || ||||| Sbjct 130208372 AACATCCAGAAGGAGTCCACCCTCCACCTCGTCCT 130208338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659121162560