Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 100 7e-16 seq7 98.7 3e-15 seq10 93.3 1e-13 >seq3 Length=136109863 Score = 100 bits (110), Expect = 7e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761 |||||||||||| | ||| ||| || || |||||||| ||||||||||||||||| Sbjct 7447229 CAGTTTTATGTAGCAAATGGGGAGCTCTCGTGTCAAATGTACCAGCGATCTGCTGATATG 7447170 Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 || || ||||| || |||||||||||| ||| ||||| | || ||| | || |||||| Sbjct 7447169 GGCCTGGGTGTGCCATTTAATATTGCATCTTATGCACTCTTGACATGCATGATTGCTCAT 7447110 Query 111822 TTT 111824 || Sbjct 7447109 GTT 7447107 Score = 91.5 bits (100), Expect = 4e-13 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| || || ||||| || ||| || ||||| || | ||| || | ||| | Sbjct 115211155 TTGCTTCCTCATATGTATGAAAGATGATAGTATAGAGGGAATATATGATACTTTGAAGGA 115211214 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG- 363724 |||||| | || ||| ||||| ||||||||||| || | ||||| |||||| Sbjct 115211215 GTGTGCTGTCATCAGCAAATCAGCAGGGGGAATTGGTGTTTCTGTTCACAACATTCGTGC 115211274 Query 363725 CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 ||| | ||| ||||| || || || | |||| | || ||||| | ||||| ||||| Sbjct 115211275 CACTG-GCAGCTACATCCGTGGAACGAATGGGACA-TCCAATGGTATTGTTCCTATGCTA 115211332 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||||||| | ||||||| | || || || || || ||||| ||| | ||||| Sbjct 115211333 CGTGTGTTCAATGATACTGCTCGCTATGTTGATCAAGGGGGAGGCAAGAGGAAAGG 115211388 >seq7 Length=126351151 Score = 98.7 bits (108), Expect = 3e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 111701 CCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760 |||||| |||||| | ||| | | ||||| ||||||||||||||||||||||| || Sbjct 105584100 CCAGTTCTATGTAGCAAATGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCTGACAT 105584159 Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 || || || || || |||||||||||| ||| || || || || ||| |||| ||||| Sbjct 105584160 GGGCCTAGGCGTGCCATTTAATATTGCATCTTATGCCCTCCTGACCTGCATAATTGCTCA 105584219 Query 111821 TTTT 111824 | || Sbjct 105584220 TGTT 105584223 >seq10 Length=136175642 Score = 93.3 bits (102), Expect = 1e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 111701 CCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760 |||||| |||||| | ||| | | ||||| ||||||||||| ||||||||||| || Sbjct 132989172 CCAGTTCTATGTAGCGAATGGGGAGTTATCATGTCAAATGTATCAACGATCTGCTGACAT 132989231 Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 || || || || || |||||||||||| ||| || || || || ||| |||| ||||| Sbjct 132989232 GGGCCTAGGCGTGCCTTTTAATATTGCATCTTATGCCCTCCTGACCTGCATAATTGCTCA 132989291 Query 111821 TTTT 111824 | || Sbjct 132989292 TGTT 132989295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344448828536