Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 8e-16 seq9 86.0 5e-12 >seq3 Length=136109863 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 |||||||| || || ||||| | ||||| || ||||| ||| | || ||| || | Sbjct 25369795 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTC- 25369737 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| || ||| | || || |||||| ||||||||||| |||| ||| | Sbjct 25369736 -CGATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACC 25369678 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||||| ||||||| || || |||||| | ||||||| | |||| | |||||||| | Sbjct 25369677 AGCAAAGGCTTATTTTCGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACA 25369618 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || || || || | || ||||| Sbjct 25369617 ACATTCAGAAGGAATCCACACTCCACTTGGTG 25369586 >seq9 Length=147089397 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || ||||||||||| ||| | || ||| | | Sbjct 145228843 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 145228902 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || ||||| |||||| |||| || || Sbjct 145228903 GACACCATT-GACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCA 145228961 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | ||| ||||| || | || |||| | ||| |||||||||| || Sbjct 145228962 GCAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAA 145229021 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| || | || | |||||| Sbjct 145229022 TATCCAGAAGGAGTCAACCCTCCACCTTGTGTTG 145229055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425341159233760