Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6 114 2e-20 seq3 111 2e-19 seq9 95.1 2e-14 seq10 84.2 3e-11 seq2 84.2 3e-11 seq7 82.4 1e-10 >seq6 Length=137147148 Score = 114 bits (126), Expect = 2e-20 Identities = 406/625 (65%), Gaps = 12/625 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| ||| || |||||||||||||| || || || |||| || || ||||| || | Sbjct 120287563 ACAGCAAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGA 120287622 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 32771 | || | || ||||||| || |||||||| ||||||||||| || ||| | | | || Sbjct 120287623 AGGTTAAACCTGGCATTAACCCGCGCTTTTTCAGCCAAAATATCGA-GCAGAAGCTCCCG 120287681 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT- 32830 || ||||| || ||||| || || || || | | | ||| | || || Sbjct 120287682 GAGAAGAAGATCCCTTCGACACAGGCGAACGC--GACGATGCGTTCCGCGAACGATTCTG 120287739 Query 32831 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 32889 | ||| ||||| | | ||||| ||||| ||||| ||||| ||||| | ||||| | Sbjct 120287740 AGCCATCGATCCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAA 120287799 Query 32890 TAGCATTAAAGAGATAGtttttttCATTACTA-TCTTTAACATATGTATCAATCAAAAGA 32948 | || | |||||| || || || | | | ||||| | || || || | | || Sbjct 120287800 TTGCGTGGAAGAGACGATTCTTCTC-TGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGG 120287858 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || ||||| || || || ||||| || || || || || || ||||||||| | ||| Sbjct 120287859 CTGTACATCTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCC 120287918 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 |||| | ||| || || | || | | | || | ||| || || || || || Sbjct 120287919 TCGGAGACCTGAACCTCCTTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCG 120287978 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTAGTT 33126 || || || || || | || || | ||||| | ||| | |||| || | Sbjct 120287979 GATGCGGCGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGAT 120288038 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||| | || || || | || ||||| ||| ||||||| || ||||||| Sbjct 120288039 --TCCCAGTGGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCT 120288096 Query 33187 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 33246 | || || || ||||| | ||| || ||| | ||||| ||||| || || ||||| | Sbjct 120288097 CCGCTTTCTTGTACATTTCCCATATCTCAGGGTATTGGATTGGGAACATGCAGAATCTGT 120288156 Query 33247 TTGGATTTTTTGCAAGGATTGGTTC 33271 || ||| ||||||| ||| || Sbjct 120288157 CAGGGTTTGGAGCAAGGAGTGGCTC 120288181 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 ||||||||||||||| ||||| || || ||| ||||| ||| |||||| ||||| Sbjct 67164552 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTA 67164493 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 || || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 67164492 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 67164433 Query 63400 ATAGATGCCCTCTATACTATCATCCATCAT 63429 ||| || ||||||||||||||||| |||| Sbjct 67164432 ATATATTCCCTCTATACTATCATCTTTCAT 67164403 >seq3 Length=136109863 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 ||| || ||||| | || | ||| || | ||| | || | | ||| |||| |||||| Sbjct 115211374 TCCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACACGTAGCATAGGAACAATACC 115211315 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||||||||| ||||| || || ||| ||||| ||| |||||||||| || || || Sbjct 115211314 ATTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCACGAATGTTGTGAACAGA 115211255 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| ||||||||||| ||| ||| | || || || || |||||||| || Sbjct 115211254 AACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCTTCAAAGTATCATATAT 115211195 Query 63406 GCCCTCTATACTATCATCCATCAT 63429 ||||||||||||||||| |||| Sbjct 115211194 TCCCTCTATACTATCATCTTTCAT 115211171 Score = 89.7 bits (98), Expect = 7e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 ||||| ||||| || | || || ||||| ||||| |||||| ||| ||| | | | | Sbjct 115211007 GTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGAGACATCATGTGG 115210948 Query 63527 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63585 || || | ||| || ||||| || | ||| |||||||| || || || | ||| || Sbjct 115210947 TAAGTTCTGACAGCGGATTCTATGTCATCCTTG-TGAATTCCAACAGCAACCCTCATCAA 115210889 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 ||||||||| || ||||| || | ||| | | ||||| | |||||| | |||| Sbjct 115210888 CATGTGCTGGGGCCTTTCCACAACCTTTCCTTGAACCTTCAAGAGGTAGGACCTCTCCAG 115210829 Query 63646 AGTTTTAAAACCAAAATA 63663 ||||| |||||||| || Sbjct 115210828 GGTTTTGAAACCAAAGTA 115210811 >seq9 Length=147089397 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 ||||||||||||||| ||||| || || ||| ||||| ||| |||||| ||||| Sbjct 92823064 AATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGTG 92823123 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 ||| || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 92823124 AATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 92823183 Query 63400 ATAGATGCCCTCTATACTATCATCCATCAT 63429 ||| || ||||||||||||||||| |||| Sbjct 92823184 ATATATTCCCTCTATACTATCATCTTTCAT 92823213 >seq10 Length=136175642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 63279 TAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTAC 63338 |||||||||||||||| ||||| || || || ||||| ||| |||||| ||||| Sbjct 96114342 TAATACCATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGT 96114283 Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398 || | | ||| ||||||||||| ||| || | || || || || |||| Sbjct 96114282 GAACAAAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 96114223 Query 63399 CATAGATGCCCTCTATACTATCATCCATCAT 63429 |||| || ||||||||||||||||| |||| Sbjct 96114222 CATATATTCCCTCTATACTATCATCTTTCAT 96114192 >seq2 Length=108997779 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 ||||||||||||||| ||||| || || || ||||| ||| |||||| ||||| Sbjct 95796887 AATACCATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGTA 95796828 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 || || | ||| ||||||||||| ||| || | || || || || ||||| Sbjct 95796827 AACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 95796768 Query 63400 ATAGATGCCCTCTATACTATCATC 63423 ||| || ||||||||||||||||| Sbjct 95796767 ATATATTCCCTCTATACTATCATC 95796744 >seq7 Length=126351151 Score = 82.4 bits (90), Expect = 1e-10 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACT 63339 ||||||||||||||| ||||| | || |||| ||||| ||| |||||| ||||| Sbjct 110209478 AATACCATTGGATGTCCCATTTATTCCACAGATGTAGCTGCCAGTGGCACAGATATTGTG 110209419 Query 63340 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 63399 || || | ||| |||| || ||| ||| || | || || || || ||||| Sbjct 110209418 AACAGAAACACCAATTCTCCTTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTATC 110209359 Query 63400 ATAGATGCCCTCTATACTATCATCCATCAT 63429 ||| || ||||||||||||||||| |||| Sbjct 110209358 ATATATTCCCTCTATACTATCATCTTTCAT 110209329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627659620800