Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq3 120 3e-22 seq8 118 9e-22 seq9 102 7e-17 seq5 100 2e-16 seq7 87.8 2e-12 >seq6 Length=137147148 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || | || || | || |||||| ||| Sbjct 34075246 ATGCAGATTTTCGTGAAGACTCTAACCGGGAAGACGATAACGTTAGAGGTGGAGAGTTCT 34075187 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | || ||||| ||| || |||||||| ||||||||||| ||||| Sbjct 34075186 GATACTATTGA-TAACGTGAAGGCAAAGATACAGGACAAAGAGGGGATTCCACCGGACCA 34075128 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || || || | || || | |||||| ||| ||||||||| Sbjct 34075127 GCAGCGTCTAATCTTTGCTGGGAAGCAGCTTGAGGACGGACGCACTCTGGCCGATTACAA 34075068 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || ||||| || ||| | || || ||||| Sbjct 34075067 CATTCAAAAGGAGTCCACCCTCCATCTTGTTCTCAGGCT 34075029 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| || | ||||| | || || || || || Sbjct 34075702 ATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATCACTCTGGAGGTTGAATCCTCC 34075643 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| ||||||||||| ||||| || || || Sbjct 34075642 GACACAATCGACAACGTGAAGGCCAAGATTCAA-GACAAAGAAGGCATTCCTCCCGATCA 34075584 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || ||||| |||| |||| |||||| | | ||||||||| Sbjct 34075583 GCAGCGACTCATCTTCGCAGGGAAACAGCTAGAGGATGGTCGCACCCTCGCCGATTACAA 34075524 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||||| || |||||||| || Sbjct 34075523 CATTCAAAAGGAGTCCACGCTCCA 34075500 >seq3 Length=136109863 Score = 120 bits (132), Expect = 3e-22 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||| ||| | || ||||| || || Sbjct 25369339 ATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCA 25369280 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || |||| || | ||| |||||||| || |||||||| || Sbjct 25369279 GATACCATTGA--CAATGTGAAAGCTAAGATTCAG-GACAAAGAGGGCATTCCACCAGAT 25369223 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | || || ||||| || || | ||||||| | || | | |||||| Sbjct 25369222 CAACAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTAC 25369163 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || || ||||| ||||||| ||| | |||| Sbjct 25369162 AATATTCAGAAGGAGTCCACTTTACATTTGGTGTTGCGGCT 25369122 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || ||| ||||||| | || || || || || Sbjct 25369567 ATGCAAATTTTCGTGAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTCGAATCCTCA 25369508 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| |||| || |||||||| || || ||||||||| Sbjct 25369507 GACACCATTGA--CAATGTCAAAGCTAAAATCCAA-GACAAAGAGGGTATCCCACCTGAC 25369451 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | |||||||| || || || | || |||| | || | | |||||| Sbjct 25369450 CAGCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCAGATTAC 25369391 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || ||||| || || || || Sbjct 25369390 AACATTCAGAAGGAGTCAACGCTTCACTTGGTTCT 25369356 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||||||||| || || ||||||| | || || ||| || Sbjct 125684143 ATGCAGATATTTGTCAAGACTTTGACAGGAAAGACCATCACTCTTGAGGTTGAGAGCTCG 125684084 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || | ||| || || || || ||||| || ||| Sbjct 125684083 GACACCATTGA--CAATGTGAAAGCCAAGATTCA-GGATAAGGAGGGAATTCCCCCGGAC 125684027 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || |||||||| ||||| | || || | ||||| | | ||||||| Sbjct 125684026 CAGCAGAGGTTGATCTTTGCCGGAAAACAGCTCGAGGACGGCCGCACCTTAGCCGATTAC 125683967 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||||||| || || | ||||| Sbjct 125683966 AACATCCAGAAGGAATCCACCCTCCACCTTGTGCT 125683932 Score = 100 bits (110), Expect = 2e-16 Identities = 144/200 (72%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| || | || || | || || ||||| || Sbjct 25369111 ATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAGTCTTCA 25369052 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||||||||| || |||||||| || || ||||||||| Sbjct 25369051 GACACCATTGA--CAATGTCAAAGCAAAAATCCAA-GACAAAGAGGGTATCCCACCTGAC 25368995 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | |||| ||||| || || || || || |||| | || | | |||||| Sbjct 25368994 CAGCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTAC 25368935 Query 25176 AATATTCAAAAAGAATCCAC 25195 || ||||| || || ||||| Sbjct 25368934 AACATTCAGAAGGAGTCCAC 25368915 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || ||| |||| || | || || || || Sbjct 25368655 ATGCAAATTTTTGTGAAGACCCTGACGGGGAAAACCATTACTTTGGAGGTCGAAAGCTCC 25368596 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| | || | ||| ||||| || || ||||| || || || Sbjct 25368595 GATACCATTGATAATGTGAAGGCGAAGATTCAG-GACAAGGAGGGTATTCCCCCGGATCA 25368537 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| ||||||||||| || |||| ||| || ||| || || || Sbjct 25368536 GCAGAGGCTCATCTTTGCTGGCAAACAATTGGAGGATGGTCGTACATTGGCAGACTATAA 25368477 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| ||||| ||||| || || ||| | || || Sbjct 25368476 TATCCAAAAGGAATCGACCCTCCATCTTGTCCT 25368444 >seq8 Length=129606920 Score = 118 bits (130), Expect = 9e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||| | || || || |||||| | ||||| || | || || | || |||||| ||| Sbjct 126486015 ATGTAGATTTTCGTGAAGACTCTAACCGGGAAGACGATAACGCTAGAGGTGGAGAGTTCT 126485956 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | || ||||| ||| || |||||||| ||||||||||| ||||| Sbjct 126485955 GATACTATTGA-TAACGTGAAGGCAAAGATACAGGACAAAGATGGGATTCCACCGGACCA 126485897 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || || || | || || | |||||| ||| |||||||| Sbjct 126485896 GCAGCGTCTAATCTTTGCTGGGAACCAGCTTGAGGACGGACGCACTCTGGCTGATTACAA 126485837 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || ||||| || ||| | || || ||||| Sbjct 126485836 CATTCAAAAGGAGTCCACCCTCCATCTTGTTCTGAGGCT 126485798 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/133 (75%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 25096 AAGAAGGG-ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT 25154 ||| |||| || ||||||||||| ||| || | || ||||| ||||| || | |||||| Sbjct 83941633 AAGGAGGGTATCCCACCTGACCAGCAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGAT 83941574 Query 25155 GATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214 | |||||| | | ||| ||||| || ||||| || || || || || || || | ||| Sbjct 83941573 GGGCGCACTCTTGCCGACTACAACATACAAAAGGAGTCGACACTTCACTTGGTTTTGAGG 83941514 Query 25215 CTAAGAGGAGGAA 25227 || || ||||||| Sbjct 83941513 CTCAGGGGAGGAA 83941501 >seq9 Length=147089397 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| ||| ||||||| | || || ||| || Sbjct 145228615 ATGCAGATCTTTGTAAAGACCCTTACCGGGAAAACCATCACCCTTGAGGTAGAGAGCTCC 145228674 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| || || ||||| || || || ||||| Sbjct 145228675 GACACCATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAG 145228734 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| || |||||||| || | || |||| ||||| ||| |||||||||| Sbjct 145228735 CAAAGGCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAAT 145228794 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || || ||||| || || || || Sbjct 145228795 ATCCAGAAGGAGTCCACACTCCACTTGGT 145228823 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||||||||| ||||||| | || |||||| || Sbjct 145229299 ATGCAGATTTTTGTGAAGACTTTGACCGGTAAGACCATCACCTTGGAGGTGGAGAGCTCC 145229358 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || |||| || || | ||| || || ||||| || ||||| ||||| Sbjct 145229359 GACACCATTGACAATGTGAAGGCTAAGATTCA-GGATAAGGAAGGTATCCCACCGGACCA 145229417 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || || ||||||| | || | | || || || Sbjct 145229418 GCAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAAGATGGAAGGACCCTTGCTGACTATAA 145229477 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || || | ||||| Sbjct 145229478 CATTCAGAAGGAGTCCACCCTTCACCTTGTGCT 145229510 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| ||| ||||||| | || || ||| || Sbjct 145228843 ATGCAGATCTTTGTGAAGACCCTTACCGGAAAAACCATCACCCTTGAGGTAGAGAGCTCC 145228902 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| || || ||||| || || || ||||| Sbjct 145228903 GACACCATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAG 145228962 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| ||||||||||| || | || |||| ||||| ||| |||||||||| Sbjct 145228963 CAAAGGCTTATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGATTACAAT 145229022 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 145229023 ATCCAGAAGGAGTCAACCCTCCA 145229045 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || ||||||| | || || ||| || Sbjct 145228387 ATGCAGATCTTTGTTAAGACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGCTCC 145228446 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| ||||| ||||| || || || || || Sbjct 145228447 GATACAATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAG 145228506 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | || |||| ||||| | | |||||| ||| Sbjct 145228507 CAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGATTATAAT 145228566 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||| || ||||| || || || || Sbjct 145228567 ATCCAAAAGGAGTCCACACTCCACTTGGT 145228595 >seq5 Length=149900536 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || || || ||||||| | || ||||| || || Sbjct 23663709 AATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACCCTTGAGGTGGAATCTTC 23663768 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| || ||| ||||||||||| || || || ||||| Sbjct 23663769 CGACACCATCGACAACGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCGCCGGACCA 23663828 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||| || || | || || | ||||| | | ||||||||| Sbjct 23663829 GCAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACACTCGCCGATTACAA 23663888 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || |||||||| ||||| ||| | || || Sbjct 23663889 CATCCAGAAAGAATCGACGCTCCATCTCGTCCT 23663921 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||| || | || |||||| || Sbjct 20297101 ATGCAGATTTTTGTTAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTGGAGAGCTCC 20297042 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || | ||| ||||| || ||||| || || ||| Sbjct 20297041 GACACCATTGA--CAATGTCAAAGCCAAGATTCAG-GACAAGGAGGGGATCCCCCCGGAC 20296985 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || || || || || || || ||||||| | || | | |||||| Sbjct 20296984 CAGCAGAGGTTGATCTTCGCAGGGAAGCAGTTGGAAGATGGAAGGACCCTTGCTGATTAC 20296925 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || || || || || || | ||||| Sbjct 20296924 AATATTCAGAAGGAGTCTACTCTTCACCTTGTGCT 20296890 >seq7 Length=126351151 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/133 (75%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 25096 AAGAAGGG-ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT 25154 ||| |||| || ||||||||||| ||| || | || ||||| ||||| || | |||||| Sbjct 110666625 AAGGAGGGTATCCCACCTGACCAGCAGAGGCTGATCTTTGCGGGCAAGCAGCTGGAAGAT 110666566 Query 25155 GATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214 | |||||| | | |||||||| || ||||| || || || || || || || | ||| Sbjct 110666565 GGGCGCACTCTTGCGGATTACAACATACAAAAGGAGTCGACACTTCACTTGGTTTTGAGG 110666506 Query 25215 CTAAGAGGAGGAA 25227 || || ||||||| Sbjct 110666505 CTCAGGGGAGGAA 110666493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325105910620