Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 170 2e-37 seq9 91.5 2e-13 seq7 87.8 2e-12 seq3 84.2 2e-11 seq4 82.4 9e-11 seq2 82.4 9e-11 >seq6 Length=137147148 Score = 170 bits (188), Expect = 2e-37 Identities = 492/750 (66%), Gaps = 13/750 (2%) Strand=Plus/Plus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 ||| || || || || || |||||| ||||| || | |||||||||| | ||| | Sbjct 120287405 ATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCA-ACGCGC 120287463 Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 | || || |||||| || || || |||| || | ||||| || |||| ||| | Sbjct 120287464 ACGGAAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTCCTTCACGATCCCCT 120287523 Query 93045 TTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGG 93104 | || | | || | || | | | | | ||||| |||||||| || ||| Sbjct 120287524 TCACACGCTCCTCAGGCAGCTTCTTTCTCAGAAGAGAGTACAGCAAGCACGCGAAATCGC 120287583 Query 93105 TATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTC 93164 || | ||||| ||||| || |||||||| || ||| ||||||||||| | | | Sbjct 120287584 AGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACC 120287643 Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACCAGaaaaaaaTATACCTTCCACG 93223 | || || || ||||||||||| | |||| || || || || || || || ||||| || Sbjct 120287644 CGCGCTTTTTCAGCCAAAATATCG-AGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACA 120287702 Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAA--ATT-TGCGGAATTACTGCTGATCCATTTT 93280 || || || || || ||||| || || ||| || | || ||||||| | Sbjct 120287703 CAGGCGAACGCGACGATGCGTTCCGCGAACGATTCTGAGCCAT------CGATCCATCGT 120287756 Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340 | ||||| |||||||| ||||| | ||||| | || || || |||| || || | Sbjct 120287757 AGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAATTGCGTGGAAGAGACGA 120287816 Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400 | ||| || ||| ||||| || |||| | || ||||| || || ||| Sbjct 120287817 TTCTTCTCTGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACATCTCTGAGTGG 120287876 Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460 | ||||| ||||| || ||||| |||||||| | || || | || ||| || || Sbjct 120287877 ATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGAGACCTGAACCTCC 120287936 Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520 | || || | ||||||| || ||| || ||||||||||| || || || || Sbjct 120287937 TTCATGAACCTTCCGGCGAGATTCTCCAGGACGATGCCATCGGATGCGGCGAAGAAGGCA 120287996 Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCT 93580 | | || | ||||| || ||| | || | || ||||| | | || || Sbjct 120287997 AGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCAGTGGCGGAGGTCG 120288056 Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||| || ||||| || | ||||| |||||||| || ||||| |||||||| ||| Sbjct 120288057 CCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTTCTTGTACATTTCC 120288116 Query 93641 CATATGTCTTGATATTGAATTGGAAATATG 93670 ||||| || | ||||| ||||| || ||| Sbjct 120288117 CATATCTCAGGGTATTGGATTGGGAACATG 120288146 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 381479 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 381538 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 381539 GTGGGTTCAAATCCCACTTCTGACA 381563 >seq9 Length=147089397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/89 (83%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 122807900 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 122807841 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||| || ||||| ||||||| || Sbjct 122807840 GTGGGTTCAAATCCCACTTCTGACAACTT 122807812 >seq7 Length=126351151 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | | | || || Sbjct 102220253 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCATGTGAGGGC 102220312 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||| || ||||| |||||||| Sbjct 102220313 GTGGGTTCAAATCCCACTTCTGACAAA 102220339 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 5463705 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 5463764 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 5463765 TGGGTTCAAATCCCACTTCTGACA 5463788 >seq3 Length=136109863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | ||| Sbjct 126976293 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGCG 126976352 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGT 126368 ||||||| || ||||| ||||| | ||||||| ||| ||||| Sbjct 126976353 TGGGTTCAAATCCCACTTCTGAC-AGCTATTATTTTAATCTTTGT 126976396 >seq4 Length=133615181 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | || Sbjct 114702556 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGC 114702615 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||| || ||||| |||||| ||| Sbjct 114702616 GTGGGTTCAAATCCCACTTCTGACATATT 114702644 >seq2 Length=108997779 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 107329530 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 107329587 Query 126325 GGGTTCGAACCCCACACCTGACAA 126348 |||||| || |||||| ||| ||| Sbjct 107329588 GGGTTCAAATCCCACAGCTGTCAA 107329611 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 107329709 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 107329766 Query 126325 GGGTTCGAACCCCACACCTGACAA 126348 |||||| || |||||| ||| ||| Sbjct 107329767 GGGTTCAAATCCCACAGCTGTCAA 107329790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856985503520