Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 105 1e-17 seq3 105 1e-17 seq5 96.9 7e-15 seq2 93.3 9e-14 seq7 91.5 3e-13 seq6 91.5 3e-13 seq10 89.7 1e-12 seq9 87.8 4e-12 seq1 87.8 4e-12 seq4 86.0 1e-11 >seq8 Length=129606920 Score = 105 bits (116), Expect = 1e-17 Identities = 198/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| || |||| ||||| || || ||||| || ||| | | | || |||||| Sbjct 110878296 GACTTTGTCAACAAAGAGCTGATACTGTTCTCCAGGGCAGATCTTCAAAGGTCCATTCCC 110878237 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 |||| |||||||||||||| || || ||||| || || | |||| ||| Sbjct 110878236 TCGATGGTTGATGGCCTCAAGCCTGGACAACGGAAGATTCTTTTCTGCTCATTTAAGAAA 110878177 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 || || | ||||||| || || | || ||| |||||||||||| || |||| Sbjct 110878176 AAGTTGTTCAAAGAAATAAAAGTGGGCCAATTTATTGGTTATGTATCTGAGCACTCTGCT 110878117 Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757 || || || |||||||| ||||| | | || | || ||||||||||| | ||| Sbjct 110878116 TATCACCATGGTGAGCAAAGTCTTGCTAGCACAATAATTGGAATGGCACAGGATTTCGTG 110878057 Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808 ||||| |||||||| || | || || || ||||| || ||| ||||| Sbjct 110878056 GGCAGCAACAACATCAATCTTCTTAAACCGAATGGTCAATTCGGTACTCGT 110878006 >seq3 Length=136109863 Score = 105 bits (116), Expect = 1e-17 Identities = 198/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| | ||||| ||||| || || ||||| || ||| | | | || |||||| Sbjct 13231017 GACTTTGTTGACAAAGAGCTAATACTCTTCTCCAGGGCAGATCTCCAAAGGTCCATTCCC 13231076 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 || | |||||||||||||| || || ||||| || ||| | |||| || | Sbjct 13231077 TCGATGATTGATGGCCTCAAGCCCAGTCAACGGAAGATTCTTTTTTGCTCATTTAAAAAG 13231136 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 || || ||||||| || || || ||||| ||||||||| || || || | Sbjct 13231137 AAGTTGACGAAAGAAATAAAAGTAGCCCAGTTCATTGGTTATGTGTCTGAGCAGTCAGCA 13231196 Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757 ||||| || || ||||| ||||| | |||| | || ||||||||||| | ||| Sbjct 13231197 TACCACCATGGAGAGCAAAGTCTTGCTAGCACCATCATCGGAATGGCACAGGATTTTGTT 13231256 Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808 ||||| |||||||| ||| | || || || ||||| |||||| | ||| Sbjct 13231257 GGCAGCAACAACATTAACCTTCTTAAACCAAATGGTCAATTTGGTACACGT 13231307 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 135391706 AGCCCGTTTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 135391647 Query 142563 CCCCAC 142568 |||||| Sbjct 135391646 CCCCAC 135391641 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 3621124 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3621183 Query 142563 CCCCAC 142568 |||||| Sbjct 3621184 CCCCAC 3621189 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || |||||||||||||| || Sbjct 3621287 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAG 3621346 Query 142563 CCCCACATCGGGCAGAA 142579 |||||| |||| ||| Sbjct 3621347 CCCCACGGTGGGCGGAA 3621363 >seq5 Length=149900536 Score = 96.9 bits (106), Expect = 7e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| Sbjct 137937108 ATAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 137937049 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 137937048 AGCCCCAC 137937041 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 13879428 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 13879487 Query 142563 CCCCAC 142568 |||||| Sbjct 13879488 CCCCAC 13879493 Score = 91.5 bits (100), Expect = 3e-13 Identities = 63/70 (90%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 |||| ||||| |||||||||||||||||||| || ||||||| || ||||||||||||| Sbjct 132381920 AGAT-GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 132381862 Query 142559 CGAGCCCCAC 142568 |||||||||| Sbjct 132381861 CGAGCCCCAC 132381852 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 5368455 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5368514 Query 142564 CCCAC 142568 ||||| Sbjct 5368515 CCCAC 5368519 >seq2 Length=108997779 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 100198228 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 100198169 Query 142563 CCCCAC 142568 |||||| Sbjct 100198168 CCCCAC 100198163 >seq7 Length=126351151 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 13321352 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 13321411 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 13321412 AGCCCCAC 13321419 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 13321502 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 13321561 Query 142563 CCCCAC 142568 |||||| Sbjct 13321562 CCCCAC 13321567 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 121018982 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 121019041 Query 142564 CCCAC 142568 ||||| Sbjct 121019042 CCCAC 121019046 >seq6 Length=137147148 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 4439759 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4439818 Query 142564 CCCAC 142568 ||||| Sbjct 4439819 CCCAC 4439823 >seq10 Length=136175642 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 28150222 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 28150281 Query 142562 GCCCCAC 142568 ||||||| Sbjct 28150282 GCCCCAC 28150288 >seq9 Length=147089397 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 4230755 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4230696 Query 142563 CCCCAC 142568 |||||| Sbjct 4230695 CCCCAC 4230690 >seq1 Length=137414913 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 34684658 AGCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 34684599 Query 142563 CCCCAC 142568 |||||| Sbjct 34684598 CCCCAC 34684593 >seq4 Length=133615181 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 114073900 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 114073841 Query 142564 CCCAC 142568 ||||| Sbjct 114073840 CCCAC 114073836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027829583300868