Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 >seq3 Length=136109863 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| || |||||||| ||||| ||| | || |||| | Sbjct 25369795 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAAAGTTCC 25369736 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| |||||| |||||||| || | ||| |||| Sbjct 25369735 GATACAATTGATAATGTCAAGGCCAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAG 25369676 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || ||||| || || || |||||||| |||||| | ||| | ||||||||||| Sbjct 25369675 CAAAGGCTTATTTTCGCCGGAAAACAACTTGAAGATGGTAGAACCCTTGCCGATTACAAC 25369616 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| || || || |||| | |||||| |||| || Sbjct 25369615 ATTCAGAAGGAATCCACACTCCACTTGGTGCTTCGTTTAAGAGGTGG 25369569 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || ||| |||| || || || || ||| |||| || | || Sbjct 25369111 ATGCAAATCTTTGTCAAGACACTAACCGGAAAGACAATAACCCTGGAGGTCGAGTCTTCA 25369052 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | || |||||| || ||||||||| | ||||| || Sbjct 25369051 GACACCATTGACAATGTCAAAGCAAAAATCCAAGACAAAGAGGGTATCCCACCTG---AC 25368995 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||||||||||||||| || || | || ||| || || | || |||||| Sbjct 25368994 CAGCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTAC 25368935 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||| || || | ||| | || || || | ||||| ||| Sbjct 25368934 AACATTCAGAAGGAGTCCACCTTGCATCTTGTTTTGCGACTCCGAGGTGGA 25368884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || || || || || ||||| || |||| |||| || || Sbjct 25369339 ATGCAGATTTTTGTCAAGACTTTGACAGGGAAGACCATAACACTGGAGGTGGAATCCTCA 25369280 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || || ||| || |||||||| | || | | ||| Sbjct 25369279 GATACCATTGACAATGTGAAAGCTAAGATTCAGGACAAAGAGGGCATTCCACCAGATCAA 25369220 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || ||||| || || || || || |||||| || || | || ||||||||| Sbjct 25369219 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAAGATGGAAGGACGCTTGCAGATTACAAT 25369160 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 ||||||||||| || ||| | ||| |||| || || Sbjct 25369159 ATTCAGAAGGAGTCCACTTTACATTTGGTGTTGCG 25369125 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || || || || |||||||| ||| | || ||| || || Sbjct 25369567 ATGCAAATTTTCGTGAAGACCTTGACTGGGAAAACCATCACCTTAGAGGTCGAATCCTCA 25369508 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | || ||||| || ||||||||| | ||||| || Sbjct 25369507 GACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCACCTG---AC 25369451 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| | || |||||||| || || || || ||| || || | || |||||| Sbjct 25369450 CAGCAGAGGTTGATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCAGATTAC 25369391 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||||| |||| | ||||| |||| || Sbjct 25369390 AACATTCAGAAGGAGTCAACGCTTCACTTGGTTCTCCGTTTGAGAGGTGG 25369341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358122408173992