Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 192 1e-43 >seq6 Length=137147148 Score = 192 bits (212), Expect = 1e-43 Identities = 558/845 (66%), Gaps = 22/845 (3%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||| ||| || || |||||| || ||||| ||||||| || ||| Sbjct 120288112 ATGTACAAGAAAGCGGAGGCATCGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGAC 120288053 Query 42369 A-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAA---AGTTTTTC-CTCAAAAACATAC 42423 | ||| |||||| || || | || ||| | ||| || |||| | | | Sbjct 120288052 CTCCGCCA-CTGGGAATCTCTCACCGACGGCGAGCGCCACTTTATCACTCA----CGTCC 120287998 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | |||||||||||||| || || ||||| ||| ||||| || ||| |||||||||| Sbjct 120287997 TTGCCTTCTTCGCCGCATCCGATGGCATCGTCCTGGAGAATCTCGCCGGAAGGTTCATGA 120287938 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||| ||| || ||||| ||| |||||||||||||||||| || || |||||| Sbjct 120287937 AGGAGGTTCAGGTCTCCGAGGCACGCGCCTTCTACGGCTTCCAGATCGCAATCGAGAACA 120287878 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC-GAGCGT 42602 | ||||| ||| ||||| | || ||| | || |||||| || | | || ||| Sbjct 120287877 TCCACTCAGAGATGTACAGCCTCCTTCTCGAAACTTACATCAAAGA-CTCATCAGAGAAG 120287819 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | || ||| | || || ||||| | || ||| | |||||||| || || ||||| Sbjct 120287818 AATCGTCTCTTCCACGCAATTGAGACCGTTCCTTGCGTAAAGAAGAAAGCCGAGTGGGCC 120287759 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 || |||||||| | | || | |||||| || | | || || || || Sbjct 120287758 CTACGATGGATCGATGGCTCAGA---ATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGT 120287702 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782 ||||| || ||||||||||| || |||| ||| || || ||||| || || | | Sbjct 120287701 GTCGAAGGGATCTTCTTCTCCGGGAGCTTCTGCTCGATATTTTGGCTGAAAAAGCGCGGG 120287642 Query 42783 TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGG 42842 | ||||| || | |||||||||||||| | ||| | || || || || || | Sbjct 120287641 TTAATGCCAGGTTTAACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTTCACTGC 120287582 Query 42843 GACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTC 42902 || || || ||| | |||| ||| | || || | |||| | ||||||| || Sbjct 120287581 GATTTCGCGTGCTTGCTGTACTC---TCTTCTGAGAAAGAAGCTGCCTGAGGAGCGTGTG 120287525 Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC 42962 || ||| | | ||| |||||||| || |||| |||||| | | |||| || Sbjct 120287524 AAGGGGATCGTGAAGGACGCCGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCT-TCC 120287466 Query 42963 GTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 ||| | |||| || |||||| ||||| ||| | |||| || ||| ||| || || Sbjct 120287465 GTGCGCGTTGGTAGGAATGAACGGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCAGA 120287406 Query 43022 CCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 | | || ||| | ||||| || | | ||||| | | ||| || || | Sbjct 120287405 TCGGTTGCTGGTGGCGCTTGGGTGCAAGAAG-GTGTACAATGTTCAGAACCCTTTTGATT 120287347 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 ||||| || ||| | |||| ||||||||||| || || ||||| || | || | Sbjct 120287346 GGATGGAACTTATTTCGCTTCAGGGGAAGACCAACTTCTTTGAAAAGCGTGTTGGGGAGT 120287287 Query 43141 ACCAG 43145 ||||| Sbjct 120287286 ACCAG 120287282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332731276480