Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 seq6 95.1 1e-14 seq8 86.0 5e-12 >seq3 Length=136109863 Score = 104 bits (114), Expect = 2e-17 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || |||| || ||||| | ||| ||||||||||||||||||||| || Sbjct 25368885 CCACCTCGGAGTCGCAAAACAAGATGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGC- 25368943 Query 33961 AATTGTCGCTCG-TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || ||| || || ||||| ||||| || ||||| || || | |||||| || || Sbjct 25368944 AAGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCAGGTGG 25369003 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTC 34076 | | ||||||||| |||||| |||| || | | || | || | ||| || Sbjct 25369004 GATACCCTCTTTGTCTTGGATTTTT-GCTT--TGACATTGTCAATGGTGTCTGAAGACTC 25369060 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || | |||||||| |||||||||||||| || |||||||||||||| Sbjct 25369061 GACCTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACAAAGATTTGCAT 25369111 >seq6 Length=137147148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 |||| || || ||||| || ||| |||||| |||||||||||||| |||| | || || Sbjct 34075029 AGCCTGAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCGGCCAGAGTG-CG 34075087 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| || | ||||| || ||||| || || |||||||| ||| || | | ||| Sbjct 34075088 TCCGTCCTCAAGCTGCTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCCTC 34075147 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 ||||||| || ||| ||| | | | | | |||||| | || || | ||| Sbjct 34075148 TTTGTCCTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAACGT 34075207 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| || || |||||||| || ||||| || || ||||| Sbjct 34075208 TATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTGCAT 34075246 >seq8 Length=129606920 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 |||| ||| || ||||| || ||| |||||| |||||||||||||| |||| | || || Sbjct 126485798 AGCCTCAGAACAAGATGGAGGGTGGACTCCTTTTGAATGTTGTAATCAGCCAGAGTG-CG 126485856 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| || | || || || ||||| || || |||||||| ||| || | | || Sbjct 126485857 TCCGTCCTCAAGCTGGTTCCCAGCAAAGATTAGACGCTGCTGGTCCGGTGGAATCCCATC 126485916 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 ||||||| || ||| ||| | | | | | |||||| | || || | ||| Sbjct 126485917 TTTGTCCTGTATCTTTGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGCGT 126485976 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| || || |||||||| || ||||| || || | ||| Sbjct 126485977 TATCGTCTTCCCGGTTAGAGTCTTCACGAAAATCTACAT 126486015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397059748119496