Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6 120 7e-22 >seq6 Length=137147148 Score = 120 bits (132), Expect = 7e-22 Identities = 559/869 (64%), Gaps = 25/869 (3%) Strand=Plus/Minus Query 242869 TCTGCAT--TCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAA 242926 ||||||| |||| ||||| || || || || ||||| ||||| ||||| || | |||| Sbjct 120288150 TCTGCATGTTCCCAATCCAATACCCTGAGATATGGGAAATGTACAAGAAAGCGGAGGCAT 120288091 Query 242927 CCTTTTGGACCACCGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAAC 242986 | || ||||| | ||||||||| || || ||| || | ||||| || | Sbjct 120288090 CGTTCTGGACAGCGGAGGAAGTTGACCTTTCCGGCGACCTCCGCCACTGG---GAATCTC 120288034 Query 242987 TCAATGACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATG 243046 ||| |||| ||| || || || |||| ||| | || | || ||||| | ||||||| Sbjct 120288033 TCACCGACGGCGAGCGCCACTTTATCACTCACGTCCTTGCCTTCTTCGCCGCATCCGATG 120287974 Query 243047 GTATTGTGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGGC 243104 | || || |||| ||||| || | || || || ||| || ||| | ||||| Sbjct 120287973 GCATCGTCCTGGAGAATCTCGCCGG--AAGGTTCATGAAGGAGGTTCAGGTCTCCGAGGC 120287916 Query 243105 ACGGCAATTTTATGCTTACCAAA---CATTCAACGAATCTATCCATTCTGAACAATATGC 243161 ||| || || | | ||| | || || | ||| ||||| || || || Sbjct 120287915 ACGCGCCTTCTACGGCTTCCAGATCGCAATCGA-GAAC--ATCCACTCAGAGATGTACAG 120287859 Query 243162 TCTTCTTATCGACGCGCTTATTTCAGATGAACA--AGAGC-GAAACGAGCTTTTCGACGC 243218 || ||| |||| | ||| ||| | || |||| ||| || || ||| |||| Sbjct 120287858 CCTCCTTCTCGAAAC--TTACATCAAAGACTCATCAGAGAAGAATCGT-CTCTTCCACGC 120287802 Query 243219 CATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTAGAACC 243278 || || | | |||| || | || || || | ||||| | ||| | || Sbjct 120287801 AATTGAGACCGTTCCTTGCGTAAAGAAGAAAGCCGAGTGGGCCCTACGATGGATCGATGG 120287742 Query 243279 CGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTC 243338 | |||| || || || || ||||||| | | || || ||||| || | || || Sbjct 120287741 CTCAGAATCGTTCGCGGAACGCATCGTCGCGTTCGCCTGTGTCGAAGGGATCTTCTTCTC 120287682 Query 243339 CGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCT 243398 |||||| |||||| | || ||||||||| || || | ||||| || | | Sbjct 120287681 CGGGAGCTTCTGCTCGATATTTTGGCTGAAAAAGCGCGGGTTAATGCCAGGTTTAACCTT 120287622 Query 243399 GTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTA-TGT 243457 || |||||||| ||| || || || ||||||||| | |||| | |||| ||| Sbjct 120287621 CTCGAACGAGTTGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCGC-GTGCTTGCTGT 120287563 Query 243458 ATTCAAAGCTCCAGAACAAGCTACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCA 243516 | || || || ||||| || | | | || || || ||| | | || || Sbjct 120287562 ACTCTCTTCTGAGAAAGAAGCTGCC-TGAGGAGCGTGTGAAGGGGATCGTGAAGGACGCC 120287504 Query 243517 GTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAAC 243576 || || | || | ||| || | |||||||| |||| ||| | | | || |||||| Sbjct 120287503 GTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGGTAGGAATGAAC 120287444 Query 243577 TCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGT 243636 || || ||| | ||||| || || ||||| || || || | | | |||||||| Sbjct 120287443 GGAGACCTGATGAGTCAGTATATTGAGTTCGTTGCAGATCGGTTGCTGGTGGCGCTTGGG 120287384 Query 243637 TATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAA 243696 | |||| |||||||| ||||||| |||| | ||||| || ||||||||||| Sbjct 120287383 TGCAAGAAGGTGTACAATGTTCAGAACCCTTTTGATTGGATGGAACTTATTTCGCTTCAG 120287324 Query 243697 GGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||||| || |||||||| ||||||||||| Sbjct 120287323 GGGAAGACCAACTTCTTTGAAAAGCGTGT 120287295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872256403800