Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 seq4 132 5e-26 seq5 122 1e-22 seq6 113 5e-20 seq9 109 6e-19 seq8 86.0 7e-12 >seq3 Length=136109863 Score = 141 bits (156), Expect = 1e-28 Identities = 153/199 (77%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 124971753 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 124971694 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || ||||||||| |||||| ||||| ||| Sbjct 124971693 GATGAGACGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 124971635 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | |||||||| || ||||| || ||||| | Sbjct 124971634 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 124971575 Query 46581 CAAAGATTTGCAT-TTTGC 46598 | ||||| ||||| ||||| Sbjct 124971574 CGAAGATCTGCATCTTTGC 124971556 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | | ||||| | || || |||||||| || ||||| Sbjct 125684408 CTCCTTTTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCAAGCTGCTTCCCCGCGAA 125684467 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | | |||||| ||| || || ||| | ||| Sbjct 125684468 GATCAACCTCTGCTGGTCCGGGGGGATTCCCTCCTTATCCTGAATTTTGGCCTTCA-CGT 125684526 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || | |||||||| ||||| || || || |||| Sbjct 125684527 TGTCGATGGTGTCGGAACTTTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAA 125684586 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 125684587 CGAATATCTGCAT 125684599 Score = 82.4 bits (90), Expect = 9e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||| ||| ||||||||||| ||||| || | ||||| || | || || Sbjct 25368675 ACCAAATGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGCAAGAGTACGGCCATCTTCA 25368734 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || || | | |||||| || | || | | ||| |||||| Sbjct 25368735 AGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCCGGAGGGATACCCTCTTTGTCCTGA 25368794 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || || ||| || |||| ||||| || || Sbjct 25368795 ATCTTCGCCTTCACATTATCAATTGTATCAGAACTTTCAACCTCCAAAGTGATTGTCTTT 25368854 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| || || ||||||||||||||| Sbjct 25368855 CCGGTCAAGGTCTTGACAAAGATTTGCATT 25368884 Score = 82.4 bits (90), Expect = 9e-11 Identities = 151/220 (69%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||| || || | || ||||||||||| ||||| || | | ||||| | Sbjct 125684156 ACGCAACACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGACC 125684215 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || || || ||||| | ||||||||| | || | | |||||| Sbjct 125684216 GTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTT 125684275 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGT 46554 ||| |||||| |||| | | | ||||| ||| || || |||| || Sbjct 125684276 GTCTTGGATCTTTGCTTTGACATTATCGATGGTGTC---CGAACTCTCAACTTCCAGGGT 125684332 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || || || || || || || || || || |||||| Sbjct 125684333 GATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCATT 125684372 >seq4 Length=133615181 Score = 132 bits (146), Expect = 5e-26 Identities = 151/199 (76%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| || ||||||||||||||||| Sbjct 130208358 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 130208417 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || ||||||||| ||||| ||| | ||| Sbjct 130208418 GATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTCA-CGT 130208476 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| |||| |||||||| || ||||| || ||||| | Sbjct 130208477 TGTCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 130208536 Query 46581 CAAAGATTTGCAT-TTTGC 46598 | ||||| ||||| ||||| Sbjct 130208537 CGAAGATCTGCATCTTTGC 130208555 >seq5 Length=149900536 Score = 122 bits (134), Expect = 1e-22 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| || ||||| | || |||||||||||| |||||||| | |||||||| | Sbjct 20297342 ACGCAAGACAAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGAGTGCGGCC 20297401 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||||||||| |||||||| ||||| | ||||||||| | || | || |||||| Sbjct 20297402 ATCCTCGAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGGGGAATGCCCTCCTT 20297461 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| ||| || ||||| | | | ||||| |||| ||||| || | || Sbjct 20297462 GTCTTGGATTTTGGCCTTGACATTATCGATGGTGTCAGAGCTC---TCCACCTCAAGGGT 20297518 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || ||||||||||| ||||| Sbjct 20297519 AATTGTCTTTCCGGTAAGGGTCTTAACAAAGATCTGCAT 20297557 Score = 118 bits (130), Expect = 1e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| ||||| |||| || ||||| |||| || |||||||| |||||||| Sbjct 23663900 TCTTTCTGGATGTTGTAATCGGCGAGTGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAG 23663841 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||| | ||| | | || ||||| |||||| ||| | ||| Sbjct 23663840 ATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTCA-CGTT 23663782 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| |||||||| || | |||||||| || ||||| || ||||| || Sbjct 23663781 GTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCAC 23663722 Query 46582 AAAGATTTGCATTTTGC 46598 || || |||||||||| Sbjct 23663721 GAAAATCTGCATTTTGC 23663705 Score = 100 bits (110), Expect = 3e-16 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | || ||||| | || |||||| |||||||||||||||| Sbjct 20297101 TGCCTCCCCTGAGACGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGG 20297160 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||| | || || |||||||| || || || ||||| | ||||||||| | | Sbjct 20297161 CCAAGGTGCGCCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCCGGGG 20297220 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATT 46541 | | | |||||||| |||||| |||| | | | ||||| |||| | Sbjct 20297221 GGATACCTTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCAGAGCTC---T 20297277 Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || | ||||||||||| || || || || || || || || ||||| Sbjct 20297278 CCACCTCAAGAGTGATGGTTTTCCCGGTGAGGGTCTTCACGAAAATCTGCAT 20297329 >seq6 Length=137147148 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||| ||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 34075739 CTCCTTCTGGATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAA 34075798 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | ||| | || |||||||| |||||| ||| | | Sbjct 34075799 GATGAGACGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTCACATT 34075858 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||| || ||||| |||| || || || || || || || ||||| || Sbjct 34075859 GTCAATGGTATCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGTTAGGGTTTTCAC 34075918 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 34075919 GAAGATCTGCAT 34075930 >seq9 Length=147089397 Score = 109 bits (120), Expect = 6e-19 Identities = 151/207 (73%), Gaps = 11/207 (5%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | || ||||| |||| |||||||||||||||||||| Sbjct 145228349 TCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 145228290 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | || |||||||| ||||| | | | | ||| Sbjct 145228289 ATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTT-TGCCTTAACGTT 145228231 Query 46523 G-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | ||||| |||| || || || | |||||||| || || || || || || Sbjct 145228230 GTCGATGGTGTCTGAGCTC---TCGACTTCGAGAGTGATGGTCTTCCCGGTGAGGGTCTT 145228174 Query 46579 AACAAAGATTTGCATTTTGCACAAACA 46605 ||| ||||||||||| | ||||||| Sbjct 145228173 AACGAAGATTTGCATCT---ACAAACA 145228150 Score = 109 bits (120), Expect = 6e-19 Identities = 158/219 (72%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| |||||| ||||||||||| |||| | ||||| | Sbjct 145228829 CGCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCA 145228770 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | | |||||||| | || | || ||||| Sbjct 145228769 TCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTTA 145228710 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| |||||| ||||| ||| | | | ||||| |||| || || || | || Sbjct 145228709 TCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTC---TCTACCTCAAGGGT 145228654 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || || || || || |||||||| ||||| Sbjct 145228653 GATGGTTTTCCCGGTAAGGGTCTTTACAAAGATCTGCAT 145228615 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||||||| || || | || |||||| ||||||||||| |||| Sbjct 145229071 TGCCACCACGGAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGG 145229012 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | || ||||||||||||||||| || || | | |||||||| | | Sbjct 145229011 CCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAG 145228952 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | || ||||| ||| |||||| ||||| ||| | | | ||||| |||| Sbjct 145228951 GGATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTC--- 145228896 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | ||||||||||| || || || || || |||||||| ||||| Sbjct 145228895 TCTACCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACAAAGATCTGCAT 145228843 Score = 105 bits (116), Expect = 8e-18 Identities = 157/219 (72%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | ||| ||||||||||||||| || |||| || ||||| | Sbjct 145228601 CGCAAGACCAAGTGGAGTGTGGACTCCTTTTGGATATTATAATCGGCGAGGGTGCGGCCA 145228542 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||||||||| || || | | |||||| || | || | || |||||| Sbjct 145228541 TCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTG 145228482 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 || |||||| ||||| ||| | | | || || |||| || || || | || Sbjct 145228481 TCTTGGATCTTGGCCTTGA-CGTTGTCGATTGTATCGGAGCTC---TCGACCTCAAGAGT 145228426 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || || || || ||||||||||| ||||| Sbjct 145228425 GATGGTCTTTCCGGTGAGGGTCTTAACAAAGATCTGCAT 145228387 >seq8 Length=129606920 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | | ||| |||| || | ||| ||||||||| || |||||||||| Sbjct 83941503 CCTCCCCTGAGCCTCAAAACCAAGTGAAGTGTCGACTCCTTTTGTATGTTGTAGTCGGCA 83941562 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 83941563 AGAGTGCGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGTGGG 83941622 Query 46487 ACGCTCTCCTTGTCC 46501 | | |||||| ||| Sbjct 83941623 ATACCCTCCTTATCC 83941637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234528116960