Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 seq3 82.4 5e-11 >seq6 Length=137147148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 |||||| || | ||| || || | || | ||| || ||||| || || |||||||| Sbjct 34075475 GCCGCCGCGAAGACGGAGAACAAGGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCGGC 34075534 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | ||| |||| || | |||||||| | || || | ||||||||||| | || Sbjct 34075535 GAGGGTGCGACCATCCTCTAGCTGTTTCCCTGCGAAGATGAGTCGCTGCTGATCGGGAGG 34075594 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | |||||||||||| || || || | ||| | | | |||||| | | ||| | Sbjct 34075595 AATGCCTTCTTTGTCTTGAATCTTGGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCAA 34075653 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 | |||| ||| || || || || |||| ||||| ||||| ||||||||| || Sbjct 34075654 CCTCCAGAGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCATGCCG 34075706 >seq3 Length=136109863 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 39507 CAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATC 39566 ||| |||||||||||||| ||| ||||| || || ||||| || | | || |||| Sbjct 25368671 CAGAACCAAATGCAAAGTAGATTCCTTTTGGATGTTGTAATCAGCAAGAGTACGGCCATC 25368730 Query 39567 GTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC 39626 || | || ||||| |||| || | | ||||||||||| || | || |||||||| Sbjct 25368731 TTCAAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCCGGAGGGATACCCTCTTTGTC 25368790 Query 39627 GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGT 39686 || || || | | | | ||| || | ||||| || |||||||| ||||| Sbjct 25368791 CTGAATCTTCGCCTTCACATTATCAATTGTATCAGAACTTTCAACCTCCAAAGTGATTGT 25368850 Query 39687 TTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || || || || ||||| ||||| Sbjct 25368851 CTTTCCGGTCAAGGTCTTGACAAAGATTTGCAT 25368883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347367280005284