Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 132 6e-26 seq6 116 4e-21 seq3 107 2e-18 >seq4 Length=133615181 Score = 132 bits (146), Expect = 6e-26 Identities = 307/458 (67%), Gaps = 6/458 (1%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || ||||||| ||||| || | | || || Sbjct 21681936 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATGACAATGATACCGGTATTACCCTCGAAC 21681877 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || | | Sbjct 21681876 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 21681819 Query 9345 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATG 9402 | | |||| || | |||| |||| || ||||| || ||||||| || ||||| || | Sbjct 21681818 CAATTCCAGTACCTCTTTGCCTTCCAACAGCATCGATTTCATCAACAAAAACAATGCAAG 21681759 Query 9403 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAA 9462 | ||| || ||| | | || | ||| ||||| | || || |||||||||| Sbjct 21681758 GAGCATTCTCTTTGGCCTTCTTGAATAAATCACGAACACGAGAAGCACCAACACCAACAA 21681699 Query 9463 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 9521 ||||||| ||||| | | | | | || | || ||| |||||| | ||| || ||| Sbjct 21681698 ACATCTCAACAAACTCAGAACCTG-AGATGGAGAAGAATGGGACACCTGCTTCCCCTGCA 21681640 Query 9522 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGT 9581 || || ||| | || |||||||| || ||||| ||| | || || | || Sbjct 21681639 ATAGCCTTGGCTAACAGCGTCTTACCGGTTCCTGGAGGACCAACAAGAAGAACTCCTTTC 21681580 Query 9582 GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCT 9641 || || || ||| || | | |||||||| | ||| ||||| ||||| | ||| Sbjct 21681579 GGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACTACCTCC 21681520 Query 9642 TCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | ||| || | || | ||| ||||||| Sbjct 21681519 ATAAAGTCCTGTTTAGCTTCATCCACCCCAGCAACATC 21681482 >seq6 Length=137147148 Score = 116 bits (128), Expect = 4e-21 Identities = 251/371 (68%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 || ||||||||||| ||||| || |||||||| || || |||| ||||| ||| | || Sbjct 141398 AAGCCATCCATCTCCGTCAAGAGCTGGTTAATGGTCTGCTCCCTCTCATCGTTCCC--GC 141455 Query 9342 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATAC 9399 | | | ||||| | | ||| | |||||||||||||||||||||||||| ||||| | Sbjct 141456 CTCCGAGACCAGCCCCTCTCTGCCTCCCCACGGCATCAATCTCATCAATGAAAACAATGC 141515 Query 9400 ATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAA 9459 | || ||| ||| | ||||| | ||| | || | || || || |||| Sbjct 141516 ACGGCGCCTTTGACTTGGCTTTCTCAAACAAATCCCTCACGCGGGAAGCACCAACCCCAA 141575 Query 9460 CAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCG 9519 |||||| |||||| || | | || | || || ||| || || | ||||| | Sbjct 141576 CAAACAGCTCCACGAACTCCGAAGCCGCGCAAGAGAAGAACGGTACTCCGGCCTCACCGG 141635 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCC- 9578 ||| || || || ||||| ||||| || || || || ||| | | || | ||||| Sbjct 141636 CAACCGCCCGAGCCAGAAGGGTCTTCCCGGTTCCAGGTGGCCCCACCA-GAAGACACCCT 141694 Query 9579 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATC 9638 ||| ||||| || || | ||| | ||||| | |||||||||||| |||| Sbjct 141695 TTTGGGATCTTAGCACCCAAAGCGGTGTACTTGTCAGGGTTCTTGAGAAAATCAACAACT 141754 Query 9639 TCTTCCAATTC 9649 || | |||||| Sbjct 141755 TCCTGCAATTC 141765 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || || |||||||| || || | || || |||||| || |||||||| | || Sbjct 120287585 GTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACCTGGCATTAACCC 120287644 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 ||||| |||| |||| | || | |||||| ||||||||||||||| || || ||||| Sbjct 120287645 GCGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATCCCTTCGACACA 120287704 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || ||||| | | ||| || ||||| || Sbjct 120287705 GGCGAACGCGACGATGCGTTCCGCGAACGA 120287734 >seq3 Length=136109863 Score = 107 bits (118), Expect = 2e-18 Identities = 278/420 (66%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || || || | || ||||| | | ||||| Sbjct 131892781 TCAAGAATGTCAGCCCTGTTAGTAGCTGCAATTACGATGATGCCTGTATTACCCTCAAAC 131892840 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||| || || | || ||||| | |||||||||| || | Sbjct 131892841 CCATCCATTTCTGTCAAAAGCTGATTGAGTGTCTGTTCTCTTTCATCATTCCCT---CCA 131892897 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| | || || |||||||| ||||||| ||| ||||| || Sbjct 131892898 CCAATTCCAGTCCCTCTTTGTCTCCCAACAGCATCAATTTCATCAACGAACACAATGCAA 131892957 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || || | | || | ||| || || | | || || | ||||||| Sbjct 131892958 GGGGCATTCTCTTTAGCCTTCTTGAATAAATCACGGACTCGTGAAGCACCGATACCAACA 131893017 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| || ||| || ||| || |||||| || Sbjct 131893018 AACATCTCAACAAACTCAGAACCTG-AGATTGAGAAGAACGGAACACCAGCTTCACCAGC 131893076 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 || || ||| | ||| ||||| || || || || || | || || ||||| Sbjct 131893077 GATCGCCTTGGCCAAAAGGGTCTTCCCAGTTCCAGGAGGTCCAACAAGAAGAACACCCTT 131893136 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 ||| || || ||| || | | || ||||| | ||| ||||| ||||| | ||| Sbjct 131893137 TGGTATGCGAGCTCCAACAGCAGTGAACCTTTCAGGCTTCTTCAGAAACTCCACCACCTC 131893196 Score = 104 bits (114), Expect = 3e-17 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || || |||||||| ||||||||||| || ||||| | || ||| ||||| | ||| Sbjct 115211019 TGAGGCCTTGGTGTTCCAGCATTGAAAAGTGTTGGGGAAGCATGAGTGAACCATCTTTGA 115210960 Query 107228 GACATCTTGTCGTATG-TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| ||| ||| | ||| || | || || ||||| ||| ||| || || | || Sbjct 115210959 GACATCATGTGGTAAGTTCTGACAG-CGGATTCTATGTCATCCTTGTGAATTCCAACAGC 115210901 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA-- 107344 || | ||| ||||||| ||||| |||||| | | || | || || || |||| Sbjct 115210900 AACCCTCATCAACATGTGCTGGGGCCTTTCCACAACCTTTCC-TTGAACC-TTCAAGAGG 115210843 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 ||| | |||| |||||||||| |||||||||| || | || |||||| Sbjct 115210842 TAGGACCTCTCCAGGGTTTTGAAACCAAAGTAATCATAGTCGAAGTCCC 115210794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976758631520