Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-18 seq8 93.3 3e-14 seq7 93.3 3e-14 seq9 89.7 3e-13 seq4 84.2 1e-11 >seq3 Length=136109863 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || |||| ||||||||||||||||| || Sbjct 125684637 TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGGCCATCCTCCAGCTGTTTTCCGGCGAAG 125684696 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 ||||| || |||||||| | || | ||| ||||| || ||| ||| || || || Sbjct 125684697 ATTAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTATCTTGAATTTTCGCCTTCAC--AT 125684754 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| ||| ||| || |||| || ||||| ||||| ||||| ||||| Sbjct 125684755 --TATCGATGGTGTCAGAACTCTCGACCTCGAGAGTAATGGTCTTTCCGGTGAGGGTCTT 125684812 Query 34967 CACAAAGATCTGCAT 34981 || ||||| ||||| Sbjct 125684813 GACGAAGATTTGCAT 125684827 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | |||| ||| ||||||||||| || || | |||| ||| |||| || Sbjct 25369587 ACCAAGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGCAAGGGTTCTACCATCTTCA 25369646 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||||||||| || || || | ||||||||| | || | || || || || | Sbjct 25369647 AGTTGTTTTCCGGCGAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGA 25369706 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATT-CACCGG---CCTCAACATCGACGGTTATGGT 34948 || || ||||| || |||| ||| | ||| || || || | ||| ||||| Sbjct 25369707 ATTTTGGCCTTGAC--AT--TATCAATTGTATCGGAACTTTCCACCTCAAGGGTGATGGT 25369762 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| | || ||||| ||||| ||||| Sbjct 25369763 CTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 25369795 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || | |||| | | | |||| |||| ||| || || ||||| Sbjct 25368921 TCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCCTCCAACTGCTTACCAGCAAAG 25368980 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| |||||||| | || | ||||| ||||| || || |||||| Sbjct 25368981 ATAAGTCTCTGCTGGTCAGGTGGGATACCCTCTTTGTCTTGGATTTTTGCTTTGACATTG 25369040 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | |||||| || ||||| || || ||||| ||| Sbjct 25369041 TCAATGGTGTCTGAAGACTCGACCTCCAGGGTTATTGTCTTTCCGGTTAGTGTCTTGACA 25369100 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 25369101 AAGATTTGCAT 25369111 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 124971752 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 124971693 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| |||||| Sbjct 124971692 ATGAGACGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 124971633 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| ||||| || ||||| || || ||||| Sbjct 124971632 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACG 124971573 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 124971572 AAGATCTGCATCTT 124971559 >seq8 Length=129606920 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805 ||||| |||||||||| | ||||||||||||||||| ||| || || || ||||| Sbjct 83941494 ATCATGGTTCCTCCCCTGAGCCTCAAAACCAAGTGAAGTGTCGACTCCTTTTGTATGTTG 83941553 Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 ||||| | ||| | || |||| |||||||| || || ||||| || || | |||||| Sbjct 83941554 TAGTCGGCAAGAGTGCGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGG 83941613 Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888 || | || | |||||||| || Sbjct 83941614 TCAGGTGGGATACCCTCCTTATC 83941636 >seq7 Length=126351151 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805 ||||| |||||||||| | ||||||||||||||||| ||| || || || ||||| Sbjct 110666486 ATCATGGTTCCTCCCCTGAGCCTCAAAACCAAGTGAAGTGTCGACTCCTTTTGTATGTTG 110666545 Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 || |||| ||| | || |||| |||||||| || || ||||| || || | |||||| Sbjct 110666546 TAATCCGCAAGAGTGCGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGG 110666605 Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888 || | || | |||||||| || Sbjct 110666606 TCAGGTGGGATACCCTCCTTATC 110666628 >seq9 Length=147089397 Score = 89.7 bits (98), Expect = 3e-13 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 || ||| |||||||| | |||| || || || || ||||| || | ||| | || | Sbjct 145228602 CCGCAAGACCAAGTGGAGTGTGGACTCCTTTTGGATATTATAATCGGCGAGGGTGCGGCC 145228543 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || ||||| || |||||||| || || | ||||| || | || | || ||||| Sbjct 145228542 ATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGGATGCCTTCCTT 145228483 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTC-ACCGGC---CTCAACATCGACGG 34941 ||| ||||| |||||| | |||||| | ||| ||| || || | | Sbjct 145228482 GTCTTGGATCTTGGCCTTGACGT----TGTCGATTGTATCGGAGCTCTCGACCTCAAGAG 145228427 Query 34942 TTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| ||||| ||||| ||||| |||||||||||||| Sbjct 145228426 TGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATCTGCAT 145228387 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 || ||| |||||||| | |||| || ||||| || || || || | | | | || | Sbjct 145228830 CCGCAAGACCAAGTGGAGTGTGGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCC 145228771 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || ||||| || ||||| || || || | ||||||||| | || | || ||||| Sbjct 145228770 ATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTT 145228711 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 || ||||| |||||| | || | || | ||| || || | ||| || Sbjct 145228710 ATCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCTACCTCAAGGGTGAT 145228651 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| || || || ||||| |||||||||||||| Sbjct 145228650 GGTTTTCCCGGTAAGGGTCTTTACAAAGATCTGCAT 145228615 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || | | | | || |||| || ||||| || |||||||| Sbjct 145229033 TCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 145228974 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || ||||| || ||||| |||||| Sbjct 145228973 ATAAGCCTTTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTG 145228914 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| ||||||||||| || || ||||||||| Sbjct 145228913 TCAATGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTTTTTCCGGTAAGGGTCTTCACA 145228854 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 145228853 AAGATCTGCAT 145228843 >seq4 Length=133615181 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| || Sbjct 130208359 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 130208418 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| |||||| || ||| Sbjct 130208419 ATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTG 130208478 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| ||||| || ||||| || || ||||| Sbjct 130208479 TCGATGGTGTCGGAAGACTCCACCTCCAGGGTGATGGTCTTCCCCGTTAGGGTTTTCACG 130208538 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 130208539 AAGATCTGCATCTT 130208552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631431853344