Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 104 3e-17 seq1 95.1 1e-14 seq9 91.5 2e-13 seq6 91.5 2e-13 seq8 84.2 2e-11 seq2 84.2 2e-11 seq10 82.4 9e-11 seq7 82.4 9e-11 >seq3 Length=136109863 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 || |||||||| | ||| | ||||||| || | || | || ||| || ||||||||| Sbjct 115211373 CCCCCTTGATCAACATAGCGAGCAGTATCATTGAACACACGTAGCATAGGAACAATACCA 115211314 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| ||||| || || || ||| | || | || || || ||| Sbjct 115211313 TTGGATGTCCCATTCGTTCCACGGATGTAGCTGCCAGTGGCACGAATGTTGTGAACAGAA 115211254 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| || || ||||| ||| || | ||||||| || | |||||||| ||| Sbjct 115211253 ACACCAATTCCCCCTGCTGATTTGCTGATGACAGCACACTCCTTCAAAGTATCATATATT 115211194 Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 || ||||||||||||||| ||||| || || || |||||| Sbjct 115211193 CCCTCTATACTATCATCTTTCATACATATGAGGAAGCAACTA 115211152 >seq1 Length=137414913 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| |||||||| || ||||| |||||| ||| | ||||| |||||||| ||| Sbjct 128085219 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATTAGCTCATTTGAAAATGTCAAA 128085278 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAG 19057 || ||||| | |||||| ||||| | ||||||||||| Sbjct 128085279 CCTGGCATTAATCCTCTCTTTTTAAGCCAGAATATAG 128085315 >seq9 Length=147089397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 48412 CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC 48471 |||||||||| ||| | ||||| ||||| || || || ||| | || | ||||| Sbjct 92823063 CAATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGT 92823122 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 ||| |||| ||| || || ||||| ||| || | ||||||| || | |||| Sbjct 92823123 GAATAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 92823182 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 |||| ||||| ||||||||||||||| |||||| || | || |||||| Sbjct 92823183 CATATATTCCCTCTATACTATCATCTTTCATATATATGAAGAAGCAACTA 92823232 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 48412 CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC 48471 |||||||||| ||| | ||||| |||| || || || ||| | || | ||||| Sbjct 134224432 CAATACCATTGGATGTCCCATTTGTTCTATGTATGTAGCTGCCAGTGGCACAGATATTGT 134224491 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 ||| |||| || || | ||||| ||| || | ||||||| || | |||| Sbjct 134224492 GAATAGAAACGCCAATTCTCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 134224551 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 |||| ||||| ||||||||||||||| |||||| || || || |||||| Sbjct 134224552 CATATATTCCCTCTATACTATCATCTTTCATATATATGAGGAAGCAACTA 134224601 >seq6 Length=137147148 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 48412 CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC 48471 |||||||||| ||| | ||||| ||||| || || || ||| | || | ||||| Sbjct 67164553 CAATACCATTGGATGTCCCATTTGTTCCACGGATGTAGCTGCCAGTGGCACAGATATTGT 67164494 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 || |||| ||| || || ||||| ||| || | ||||||| || | |||| Sbjct 67164493 AAACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 67164434 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 |||| ||||| ||||||||||||||| |||||| || || || |||||| Sbjct 67164433 CATATATTCCCTCTATACTATCATCTTTCATATATATGAGGAAGCAACTA 67164384 >seq8 Length=129606920 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCT 48463 |||| | |||||||||| ||| | ||||| ||||| || || || ||| | || | Sbjct 38741319 CATTTGATCAATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACA 38741378 Query 48464 TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTT 48523 ||||| || |||| ||| || | ||||| ||| || | ||||||| || Sbjct 38741379 AATATTGTGAACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTT 38741438 Query 48524 AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGA 48583 | |||||||| |||| ||||||||||||||| |||||| || || || |||||| Sbjct 38741439 CAAAGTATCATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACT 38741498 Query 48584 CATTTG 48589 || ||| Sbjct 38741499 CAATTG 38741504 >seq2 Length=108997779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCT 48463 |||| | |||||||||| ||| | ||||| ||||| || || || ||| | || | Sbjct 62922197 CATTTGATCAATACCATTAGATGTCCCATTTGTTCCACGTATGTAGCTGCCAATGGCACA 62922138 Query 48464 TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTT 48523 ||||| || |||| ||| || | ||||| ||| || | ||||||| || Sbjct 62922137 AATATTGTGAACAGAAACACCAATTTCCCCTGCTGATTTGCCAATGACAGCACACTCCTT 62922078 Query 48524 AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGA 48583 | |||||||| |||| ||||||||||||||| |||||| || || || |||||| Sbjct 62922077 CAAAGTATCATATATTCACTCTATACTATCATCTTTCATATATATAAGGAAGCAACTACT 62922018 Query 48584 CATTTG 48589 || ||| Sbjct 62922017 CAATTG 62922012 >seq10 Length=136175642 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 48412 CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC 48471 |||||| ||| ||| | ||||| ||||| || || || ||| | || | ||||| Sbjct 95030705 CAATACTATTGGATGTCCCATTTGTTCCACGTATGTAGCTGCCAGTGGCACAGATATTGT 95030764 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 || |||| ||| || || ||||| ||| || | ||||||| || | ||| Sbjct 95030765 GAACAGAAACACCAATTCCCCCTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAC 95030824 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 |||| ||||| ||||||||||||||| |||||| || || || |||||| Sbjct 95030825 CATATATTCCCTCTATACTATCATCTTTCATATATATAAGGAAGCAACTA 95030874 >seq7 Length=126351151 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 48412 CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTAC 48471 |||||||||| ||| | ||||| |||| | || || || ||| | || | ||||| Sbjct 110209479 CAATACCATTGGATGTCCCATTTATTCCACAGATGTAGCTGCCAGTGGCACAGATATTGT 110209420 Query 48472 TAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531 || |||| ||| || | | ||| ||| || | ||||||| || | |||| Sbjct 110209419 GAACAGAAACACCAATTCTCCTTGCTGATTTGCTAATGACAGCACACTCCTTCAAAGTAT 110209360 Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 |||| ||||| ||||||||||||||| |||||| || || || |||||| Sbjct 110209359 CATATATTCCCTCTATACTATCATCTTTCATATATATGAGGAAGCAACTA 110209310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562104949554720