Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 196 9e-45 >seq6 Length=137147148 Score = 196 bits (216), Expect = 9e-45 Identities = 571/865 (66%), Gaps = 26/865 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || | || ||||||||||| |||||||||| | ||| || || Sbjct 120287282 CTGGTACTCCCCAACACGCTTTTCAAAGAAGTTGGTCTTCCCCTGAAGCGAAATAAGTTC 120287341 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||| | || ||||| | || |||||| | || || || | | ||||| Sbjct 120287342 CATCCAATCAAAAGGGTTCTGAACATTGTACACCTTCTTG-CAC-CCAAGCGCCACCAGC 120287399 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 | |||| || ||| |||| || || | ||| ||| |||||| |||| | Sbjct 120287400 AACCGATCTGCAACGAACTCAATATACTGACTCATCAGGTCTCCGTTCATTCCTACCAAC 120287459 Query 48017 GA-CACGGGCAAAGC-CTTTGTG-AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 | ||||| |||| | | | | ||||||| ||||||| | |||||| ||| ||| Sbjct 120287460 GCGCACGG---AAGCGCGTCGCACACAAACTCCCTCTCTATATCCACGGCGTCCTTCACG 120287516 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| ||| || || ||| | | || || | ||| | | || |||| ||| Sbjct 120287517 ATCCCCTTCACACGCTCCTCAGGCAGCTTCTTTCTCAGAAGAGAG---TACAGCAAGCAC 120287573 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || || || | ||| | |||||| || || ||| | | |||| |||||| | ||| Sbjct 120287574 GCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAGGTTAAACCT 120287633 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | ||| | || ||| ||||| || || | ||| || ||||||||||| Sbjct 120287634 GGCATTAACCCGCGCTTTTTCAGCCAAAATATCGAGCAGAAGCTCCCGGAGAAGAAGATC 120287693 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT-GTCTGAGAT 48312 || || || ||||||||| || | || |||| || |||| | | ||| Sbjct 120287694 CCTTCGACACAGGCGAACGCGACGATGCGTTCCGCGAACGA----TTCTGAGCCATCGAT 120287749 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 ||| || ||||| || || |||||||| | ||| || | ||||| || || |||| Sbjct 120287750 CCATCGTAGGGCCCACTCGGCTTTCTTCTTTACGCAAGGAACGGTCTCAATTGCGTGGAA 120287809 Query 48373 GAGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 ||| ||||| ||| || ||| | || || ||| || |||||| Sbjct 120287810 GAGACGATTCTT---CTCTGATGAGTCTTTGATGTAAGTTTCGAGAAGGAGGCTGTACAT 120287866 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || ||||||||||| ||||||||||| | ||||| | || Sbjct 120287867 CTCTGAGTGGATGTTCTCGATTGCGATCTGGAAGCCGTAGAAGGCGCGTGCCTCGGAGAC 120287926 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | ||| || ||| || |||||||| ||| || ||||| || || | Sbjct 120287927 CTGAACCTCCTTCATGAACCT-TCCGGCGAGATTCTCCAGGACGATGCCATCGGATGCGG 120287985 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGC 48608 | |||||||||||||| || | | || ||||||||| || |||||||| | |||| Sbjct 120287986 CGAAGAAGGCAAGGACGTGAGTGATAAAGTGGCGCTCGCCGTCGGTGAGAGATTCCCAGT 120288045 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | | ||| | ||||| ||||| ||| | |||||||| || || ||||| | Sbjct 120288046 GGCGGAGGTCGCCGGAAAGGTCAACTTCCTCCGCTGTCCAGAACGATGCCTCCGCTTTCT 120288105 Query 48669 TGTACATGCCCCATATGTCCGGATA 48693 ||||||| ||||||| || || || Sbjct 120288106 TGTACATTTCCCATATCTCAGGGTA 120288130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526419000320