Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-26 seq6 131 3e-25 seq5 84.2 4e-11 >seq3 Length=136109863 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| || ||||| |||| || | ||| | || || ||| || Sbjct 25369559 AATTTGCATGCCACCTCTTAAACGAAGCACCAAGTGGAGTGTGGATTCCTTCTGAATGTT 25369618 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || |||| | |||||| ||| || | |||||||||||| ||||| | || || || Sbjct 25369619 GTAATCGGCAAGGGTTCTACCATCTTCAAGTTGTTTTCCGGCGAAAATAAGCCTTTGCTG 25369678 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||||| |||||||||||||| || ||||||| || | ||| ||| |||||||| Sbjct 25369679 GTCAGGAGGGATTCCTTCTTTATCCTGAATTTTGGCCTTGACATTATCAATTGTATCGGA 25369738 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || || || || || || || || || | ||||| || || |||||||| Sbjct 25369739 ACTTTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 25369795 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| || || |||| || | || | ||| || ||| || || || Sbjct 25369338 ATGCCACCTCTCAAACGGAGAACCAAGTGAAGCGTTGACTCCTTCTGAATGTTGTAATCT 25369397 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || || ||| || | || || || |||||||| || ||||| || ||||| Sbjct 25369398 GCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 25369457 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| ||||| | ||| | ||| ||| || || || || || Sbjct 25369458 GGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCTGAGGATTCG 25369517 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||| || || ||||| || || | || || || || |||||||| Sbjct 25369518 ACCTCTAAGGTGATGGTTTTCCCAGTCAAGGTCTTCACGAAAATTTGCAT 25369567 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 |||||||||||||| || || ||||| || || || || ||||| || ||||| || || Sbjct 125683998 TGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTATCCTGAATC 125684057 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| ||| | ||| ||| || || || |||||| || ||||| || || || ||| Sbjct 125684058 TTGGCTTTCACATTGTCAATGGTGTCCGAGCTCTCAACCTCAAGAGTGATGGTCTTTCCT 125684117 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || | || || |||||||| ||||| Sbjct 125684118 GTCAAAGTCTTGACAAATATCTGCAT 125684143 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | || || ||||||||||| | || || | | | Sbjct 25368441 CGAAGGACAAGATGGAGGGTCGATTCCTTTTGGATATTATAGTCTGCCAATGTACGACCA 25368500 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || ||||| || | ||||| ||||| || || || || || || Sbjct 25368501 TCCTCCAATTGTTTGCCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATACCCTCCTTG 25368560 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | ||| ||| |||||||| || || || | ||| || Sbjct 25368561 TCCTGAATCTTCGCCTTCACATTATCAATGGTATCGGAGCTTTCGACCTCCAAAGTAATG 25368620 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || ||||| |||||||| Sbjct 25368621 GTTTTCCCCGTCAGGGTCTTCACAAAAATTTGCAT 25368655 Score = 89.7 bits (98), Expect = 9e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||| || || | ||| || |||||| || || | | ||| || ||| || Sbjct 25369131 ACCAAATGTAAAGTGGACTCCTTCTGAATATTGTAATCTGCAAGCGTCCTTCCATCTTCA 25369190 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | || || ||||| || || | ||||||||||| || || || || ||||| || || Sbjct 25369191 AGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATGCCCTCTTTGTCCTGA 25369250 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | ||| | ||| ||| ||||| || || || || || || ||||| || || Sbjct 25369251 ATCTTAGCTTTCACATTGTCAATGGTATCTGAGGATTCCACCTCCAGTGTTATGGTCTTC 25369310 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || ||||| || ||||| Sbjct 25369311 CCTGTCAAAGTCTTGACAAAAATCTGCAT 25369339 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || |||| | ||| || || ||||| || ||||| |||||||| ||| Sbjct 125684682 TGTTTTCCGGCGAAGATTAGACGCTGCTGGTCGGGAGGGATCCCTTCCTTATCTTGAATT 125684741 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | || | ||| || || || ||| ||| || || ||||| || || || || Sbjct 125684742 TTCGCCTTCACATTATCGATGGTGTCAGAACTCTCGACCTCGAGAGTAATGGTCTTTCCG 125684801 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || |||||||| Sbjct 125684802 GTGAGGGTCTTGACGAAGATTTGCAT 125684827 >seq6 Length=137147148 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || | ||| | ||| || |||||||| || | ||| || || || || || Sbjct 34075245 ATCCCTCCACGCAACCTAAGAACAAGATGCAACGTCGACTCCTTCTGTATGTTGTAATCA 34075304 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||| || || |||||||| || || || || || | || ||||||||||||| Sbjct 34075305 GCAAGCGTCCTCCCGTCCTCTAATTGCTTCCCAGCGAAGATGAGTCGCTGTTGATCAGGA 34075364 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||||||||| || |||| || | || || || || ||||| ||| Sbjct 34075365 GGGATTCCTTCTTTATCTTGAATCTTGGCCTTCACGTTGTCTATTGTGTCCGAAGATTCA 34075424 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || |||||||| || || || ||||| ||||| ||||| || ||||| Sbjct 34075425 ACCTCGAGAGTTATGGTCTTTCCCGTTAGGGTTTTCACAAAGATCTGCAT 34075474 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||||||||||| | || | | || || | || |||||||| || || | | | Sbjct 34075749 ATATTATAGTCGGCAAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGACGC 34075808 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || || || || ||||| || ||||| || || | || | ||| ||| ||| Sbjct 34075809 TGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTAGCCTTCACATTGTCAATGGTA 34075868 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| ||||| || || | || || || || |||||||| ||||| || || || ||| Sbjct 34075869 TCGGAGGACTCCACCTCCAAGGTAATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGC 34075928 Query 193359 AT 193360 || Sbjct 34075929 AT 34075930 >seq5 Length=149900536 Score = 84.2 bits (92), Expect = 4e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || |||||||| || || | | ||| || || || || ||||||||||| ||||| || Sbjct 23663855 TGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCTTTGTCTTGGATC 23663796 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || || |||||||| || || || || || || || || || Sbjct 23663795 TTGGCCTTCACGTTGTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATGGTCTTCCCC 23663736 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || |||||||| Sbjct 23663735 GTTAGGGTTTTCACGAAAATCTGCATTTT 23663707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648237367360